Hydrogenophaga sp. SNF1: SOM08_11130
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Entry
SOM08_11130 CDS
T10669
Name
(GenBank) TonB-dependent receptor
KO
K16089
outer membrane receptor for ferrienterochelin and colicins
Organism
hydr Hydrogenophaga sp. SNF1
Brite
KEGG Orthology (KO) [BR:
hydr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hydr02000
]
SOM08_11130
Transporters [BR:
hydr02000
]
Other transporters
Pores ion channels [TC:
1
]
SOM08_11130
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
WQB85847
LinkDB
All DBs
Position
complement(2336193..2338397)
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AA seq
734 aa
AA seq
DB search
MSRHLTPPPARRRTPPAGRFPLQATALACGLLLLGHAHAQTAEVSLSEVVVSASGFEQEL
KQAPASISVVTRQELETRQYRDLAEALAGVEGIDVLGGTGKTGGLDISIRGMPSEYTLIL
IDGRRQNVAGDVTPNGFGAAHTSLIPPVAAIERIEIIRGPMSTLYGSDAMGGVINIITRK
VAKAWGGQLTLETGIPQDSDWGVQQRYNLYTSGPLVQDLLGLAVRGNLYRREASDFVLAP
GAAQPAAARNPAPAESRQHNLGARLTLTPNRHHELWLDVEQGRTWYDNSDGRLGTRDATT
NLLGNNPPGYQDALRFNRDQVAVGHTARLGVGLLESSLMHTETETIGRTIPGGAVPAGDP
RRGTPRELKTTNLVLDSKLVAPVGDAHVLTLGGQWWDAQLTDGLLPQKHDQTLWAVFAED
EWKLSQALTATLGARYDNHSAFGGQVSPRAYLVWDATRHWTLKGGVSKGFRAPRLNQLID
GVSGVSGQGATINIGNPNLKPETSTSTELSALFDSQAGLSSAVTLFHNKVKDKISSGGDC
TVNWVSSCSANPNATYAINVDEATTYGLELSSRVQIAKDWGLKLGYTWTGSEVIENGVKN
GQLANTARHVANAQLSWDPSDKWSLWLRGEYRGKSPRFSGDPARLTGNNLAIYQAVGDIK
AHALFHLGGAYKLSKNVTLNANIYNLFDKDFREYRLVNLNGTPTWVNGYFQGGASVSGTT
LPGRTFWLSANITF
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgacacctgaccccgccgcccgcgcggcggcgcaccccgccggctggccggttc
cccctgcaggccaccgccctcgcctgcggcctgctgttgctgggccacgcccacgcccag
accgccgaggtctcgctcagcgaggtcgtggtctccgcctcgggcttcgagcaggagctc
aagcaggcgcccgcctcgatttcggtcgtcacgcgccaggaactggaaacgcgccaatac
cgcgacctggccgaagccctggccggcgtcgaaggcatcgacgtgctcggcggcacgggc
aagaccggcggcctggacatcagcatccgcggcatgcccagcgagtacacgctgatcctc
atcgacggccgccgccagaacgtggccggcgacgtcacgcccaacggcttcggcgccgcg
cacaccagcctgatcccgccggtggccgccatcgagcgcatcgagatcatccgcgggccc
atgtccacgctctacggctccgacgccatgggcggcgtgatcaacatcatcacccgcaag
gtggccaaggcatggggcggccagctcacgctggagaccggcattccgcaggacagcgac
tggggcgtgcagcagcgctacaacctctacaccagcggccccctcgtgcaggacctgctg
ggcctggccgtgcgcggcaacctctaccgccgcgaggcctcggacttcgtgctcgccccc
ggcgcggcccagcccgccgccgcgcgcaaccccgcccccgccgaaagccgccagcacaac
ctgggcgcgcgcctcacgctcacgcccaaccgccaccacgagctctggctcgacgtggaa
cagggccgcacctggtacgacaacagcgacggccgcctgggcacgcgcgacgccaccacc
aacctgctcggcaacaacccgcccggctaccaggacgccctgcgcttcaaccgcgaccag
gtggccgtgggccacaccgcgcgcctgggcgtgggcctgctcgagtccagcctgatgcac
accgagacggagaccatcggccgcaccatccccggcggcgccgtgcccgccggcgacccg
cgccgcggcacgccgcgcgagctcaagaccaccaacctggtgctcgacagcaagctcgtg
gccccggtgggcgacgcgcacgtgctgaccctgggcggccaatggtgggacgcccagctc
accgacggcctgctgccccagaagcacgaccagaccctgtgggcggtgttcgccgaggac
gaatggaaactcagccaggcgctgaccgccacgctcggcgcccgctacgacaaccacagc
gccttcggcggccaggtgagcccgcgcgcctacctggtgtgggacgccacccggcactgg
accctcaagggcggcgtcagcaagggctttcgcgcgccgcgcctgaaccagctcatcgac
ggcgtgagcggcgtcagcggccagggcgccaccatcaacatcggcaacccgaacctcaag
cccgagaccagcaccagcaccgaactttcggcgctgttcgacagccaggccggcctgagc
agcgccgtgaccctgttccacaacaaggtcaaggacaagatcagcagcggcggcgactgc
acggtcaactgggtgtcgagctgctcggccaaccccaacgccacctacgccatcaacgtg
gacgaggccaccacctacggcctggagctcagcagccgtgtccagatcgccaaggactgg
ggcctgaagctgggctacacctggaccggcagcgaggtgatcgaaaacggtgtgaagaac
ggccagctggccaacaccgcccggcacgtggccaacgcccagctgagctgggacccgagc
gacaagtggagcctgtggctgcgcggcgagtaccgcggcaagagcccgcgcttcagcggc
gacccggcccgcctcaccggcaacaacctggccatctaccaggccgtgggcgacatcaag
gcccacgccctcttccacctgggcggcgcctacaagctgtcgaagaacgtgacgctcaac
gccaacatctacaacctgttcgacaaggacttccgggagtaccgcctggtcaacctcaac
ggcacgcccacctgggtgaacgggtacttccagggcggcgcctcggtgagcggcaccacg
ctgccgggccgcaccttctggctgtccgcgaacatcacgttctga
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