Hydrogenophaga sp. SNF1: SOM08_11245
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Entry
SOM08_11245 CDS
T10669
Name
(GenBank) Crp/Fnr family transcriptional regulator
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
hydr Hydrogenophaga sp. SNF1
Pathway
hydr02020
Two-component system
hydr02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
hydr00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SOM08_11245
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SOM08_11245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hydr03000
]
SOM08_11245
Transcription factors [BR:
hydr03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
SOM08_11245
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
HTH_Crp_2
Crp
MarR_2
HTH_23
DUF977
Motif
Other DBs
NCBI-ProteinID:
WQB81592
LinkDB
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Position
2363151..2363879
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AA seq
242 aa
AA seq
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MKLDSPAMSERRQETWGLSPEDVELWLRHDYLADRLRIRKGNLLYGQGEVSPHFFLILSG
EVRISCFEEDGQEITIEVMGPNGLCGDAPAFDGLPRFSTAVALRDAEVLRFDARRLREAF
ATHPELALSLLRIVSIKQRVLAIRLEYAFSLPPEARVLHLLRRVAGIFGTTTAQGREMTV
HLTHEQVGRMTGTSRVTVTRVINRLRQRGQLAMNGSRFVILNEGDPPGEGWPETRAEASN
TR
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atgaagctagattcccccgccatgagcgaacgccgacaagaaacctggggcctgtccccc
gaggacgtggagctgtggctgcggcacgactacctggccgaccgcctgcgtatccgcaag
ggcaacctgctgtacggacagggggaggtgtcgccgcacttcttcctgatcctctcgggc
gaggtgcgcatctcctgcttcgaggaagacgggcaggagatcaccatcgaggtcatgggc
cccaacggcctgtgcggggacgccccggcgttcgacgggctgccgcgtttctccaccgcg
gtggccctgcgcgacgccgaggtgctgcgcttcgacgcgcggcgcctgcgcgaggccttc
gccacccatcccgagctcgccctgtcgctgctgcgcatcgtgagcatcaagcagcgcgtg
ctggccatccggctcgaatacgccttctccctgccgcccgaggcgcgcgtgctgcacctg
ctgcggcgcgtggctggcatcttcggcaccaccaccgcgcagggccgggagatgaccgtg
cacctcacgcacgagcaggtggggcgcatgaccggcacctcgcgcgtgaccgtcacgcgc
gtgatcaaccgcctgcgccagcgcggtcaactggcgatgaatgggtcgcgcttcgtgatc
ctgaacgaaggcgacccgccgggcgagggctggcccgagacgcgggccgaggcctccaat
acgcgctga
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