Hydrogenophaga sp. SNF1: SOM08_11345
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Entry
SOM08_11345 CDS
T10669
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
hydr Hydrogenophaga sp. SNF1
Brite
KEGG Orthology (KO) [BR:
hydr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hydr03016
]
SOM08_11345 (truB)
Enzymes [BR:
hydr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
SOM08_11345 (truB)
Transfer RNA biogenesis [BR:
hydr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SOM08_11345 (truB)
Prokaryotic type
SOM08_11345 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
WQB81611
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All DBs
Position
2383134..2384108
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AA seq
324 aa
AA seq
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MQRQRTRVQRRPVHGVLLLDKPLGLSSNQALQKAKWLLRAEKAGHTGTLDPLATGVLPLC
FGAATKFSQLHLDADKTYETTVRLGVRTRTADAEGEVIDTRPVSCSAGQVVEVLDRFMGE
IDQVPPMHSALKKDGKALYEYAREGETVAREPRRVRIHEIELLDLQLHGEAPQLRLRVVC
SKGTYIRTLGEDIGEALGCGGHLIALRRVATGPFGVADAVTLDALEAMGETERLGALKPV
EALLEGHERIALDAEHAGRFLSGVRRRGDWPNRERVAVFGPSPADPTPTVLLGTAHVQGG
ELIPGRLLSPTDIQQILETEAPAP
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgccaacgcacgagggtgcaacggcgccccgtgcatggggtgctgctgctcgac
aaaccgctgggcctgtccagcaaccaggccttgcagaaggccaagtggctgctgcgcgcc
gaaaaggccggacacaccggcacgctcgaccccctggccacaggcgttctgccgctgtgt
tttggcgcggccaccaagttcagccagctgcacctggacgccgacaagacctacgaaacc
accgtgcgactgggcgtgcgcacgcgcacggccgacgccgagggcgaggtcatcgacacc
cgtcccgtgtcgtgctccgccggccaggtggtggaggtgctggaccgcttcatgggcgag
atcgaccaggtgccgcccatgcacagcgcgctcaagaaggacggcaaggccctgtacgag
tacgcgcgcgagggtgaaaccgtggcgcgcgagccgcgccgcgtgcgcatccacgagatc
gagctgctcgatctgcagctgcacggcgaggccccccagctgcgcctgcgcgtggtctgc
agcaagggcacctacatccgcacgctcggcgaggacatcggcgaggctttgggctgcggc
ggtcacctgatcgcgctgcgccgcgtggccaccgggccgttcggcgtggccgacgccgtc
acgctcgacgcgctcgaggcgatgggcgaaaccgagcggctgggcgccctgaagccggtc
gaggccctgctcgagggccatgaacggatcgcgctcgacgccgagcatgccgggcgcttc
ctgagcggcgtgcgccgccgcggcgactggcccaaccgcgagcgcgtggccgtcttcggc
ccttcgcccgcggaccccacgcccaccgtcctgctgggcaccgcccacgtccagggcggc
gaactcatcccggggcgcctgttgagccccaccgacatccagcaaatcctcgaaaccgag
gcacccgcaccatga
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