Hydrogenophaga sp. SNF1: SOM08_12255
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Entry
SOM08_12255 CDS
T10669
Name
(GenBank) TRAP transporter large permease
KO
K11690
TRAP-type transport system large permease protein
Organism
hydr Hydrogenophaga sp. SNF1
Pathway
hydr02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
hydr00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SOM08_12255
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hydr02000
]
SOM08_12255
Transporters [BR:
hydr02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
SOM08_12255
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctM
CitMHS
OppC_N
Motif
Other DBs
NCBI-ProteinID:
WQB81787
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All DBs
Position
complement(2575951..2577279)
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AA seq
442 aa
AA seq
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MSELVFGGLLIGALVVFVLLGVHIAVALIGIGFAGIWLMREDVEMAMRLLYLSAYNGVAD
YIFATIPLFVLMGLLVSISNVGKDTFEVAEALLRRVRGGLGVATVAANTVFAAVTGVSIA
SAAVFTRVAVPEMARHGYRTAFAAGTVAGSSVLGMMIPPSLLMIIYGVLAEQSIGTLFIA
GIIPGFMLAAVFVTMIVLMATFAPGMVFDLKRQRDMALQRVSGPLLSGAQMAGKLVPIVA
LVALVLGGLYSGFFTPTEAGGIGAFGALVVALARRSLGQGRFWRVLHETGSVSVTILILL
IAASFYSRMLSVAGVPVAISDLVQDAGLGPYGFLLIYVLIVLFLGMILDSSSILLIMTPV
AVPIASDLGFNLIQFGVLTVLAVEIGLLTPPFGISVFTVKSTLNDPRVSVEAIFGGTLPY
VVAMLFVLLLVAVFPVLSLALT
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaactggtctttggcgggctgctgatcggtgcgctcgtggtcttcgtgctgctg
ggcgttcacatcgccgtggcgctcatcggcattggcttcgcaggcatctggctcatgcga
gaggacgtggagatggccatgcgcctgctctacctttccgcctacaacggcgtggccgac
tacatcttcgccaccatcccgctgttcgttctgatgggcctgttggtgtccatatccaac
gtgggcaaggacaccttcgaggtggccgaagccctgctgcgccgcgtgcgcggcggactg
ggcgtggccacggtggcggccaacaccgtgttcgctgcggtcacgggcgtgtccatcgcc
tcggccgccgtcttcacccgcgtggccgtgcccgagatggcccgacacggctaccgcacg
gccttcgcggcgggcacggtggcgggcagttcggtgctgggcatgatgatcccgcccagc
ctgctgatgatcatctacggcgtgctcgccgagcagtccatcggcacgctgttcatcgcc
ggcatcatcccgggcttcatgctcgccgcggtgttcgtcacgatgatcgtgctgatggcc
accttcgcgcccggcatggtcttcgacctcaagcgccagcgcgacatggccctgcagcgc
gtcagcggcccactgctgagcggcgcgcagatggccggcaagctggtgcccatcgtggcc
ctggtggcgctggtgctgggcgggctctacagcggcttcttcacccccaccgaggccggc
ggcatcggcgcgttcggcgcgctggtggtggcgctggcgcggcgcagcctgggccagggc
cgcttctggcgcgtgctgcacgaaacgggcagcgtctcggtcaccatcctgatcctgctg
atcgccgcgagcttctacagccgcatgctgtcggtggcgggcgtcccggtggccatcagc
gacctggtgcaggacgccggcctggggccctatggttttctgctgatctacgtgttgatc
gtgctcttcctcggcatgatcctggactccagctccatcctgctgatcatgacgcccgtg
gccgtgcccatcgccagcgacctcggcttcaacctcatccagttcggcgtgctgaccgtg
ctcgcggtggagatcggcttgctcacgccgcccttcggcatctcggtgttcacggtgaag
tccaccttgaacgatccgcgtgtgtcggtggaggccatcttcggcggcaccctgccttac
gtggtcgcgatgctgttcgtgctgctgttggtggcggtgtttccggtgctgtcgctggcg
ctgacctga
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