Hydrogenophaga sp. SNF1: SOM08_12265
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Entry
SOM08_12265 CDS
T10669
Name
(GenBank) C4-dicarboxylate TRAP transporter substrate-binding protein
KO
K11688
TRAP-type transport system periplasmic protein
Organism
hydr Hydrogenophaga sp. SNF1
Pathway
hydr02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
hydr00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SOM08_12265
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hydr02000
]
SOM08_12265
Transporters [BR:
hydr02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
SOM08_12265
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctP
Motif
Other DBs
NCBI-ProteinID:
WQB81789
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All DBs
Position
complement(2577893..2578963)
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AA seq
356 aa
AA seq
DB search
MKLSTLAVASALALGAGLAALPAAAQQRITVNIGSSHPTSNIWAYAMKEVFQPEVDRILK
AGGGKYEIRWRENYGGTLYKFTDTRTAVRDGIVDVGMVGTVWENSAMPLQNVTYFTPFAT
TNHELLIEIFDKLNTTVPALRESWTAQNMVPLSSLITDSYDIYANFPIRTMADLHNKKIN
APGTSANWLRETGATPVDGALTTYYTNIQTGVTQGALSFASGIGPARVYEVAKYLTRVDV
GSMYFGSVAANKKFHDALPKEVQDAFAQAGKATSKAHGQHVTKTANAALDTMKAAGLQIA
DLPAAEKAKWVNGLPNIVQPWLQATGDKGKAVLKAYFDELRAHGVKPLRDWDSQNR
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgaagctttcgaccctcgccgtggccagcgcactggccctgggcgccggcctggccgcg
ctgcccgccgccgcgcaacagcgcatcacggtcaacatcggctccagccaccccacctcc
aacatctgggcctatgccatgaaggaggtgttccagcccgaggtggaccgcatcctcaag
gccggcggtggcaagtacgagatccgctggcgcgagaactacggcggcacgctctacaag
ttcaccgacacgcgcaccgccgtgcgcgacggcatcgttgacgtgggcatggtcggtacg
gtctgggaaaactcggcgatgccgctgcagaacgtcacctacttcacgcctttcgccacc
accaaccacgagctgctgatcgagattttcgacaagctcaacaccacggtgcccgcactg
cgcgagagctggaccgcacagaacatggtgccgctgtcttcgctgatcaccgacagctac
gacatctacgccaacttcccgatccgcaccatggccgatcttcacaacaagaagatcaac
gcgcccggcacctcggccaactggctgcgcgagaccggcgccacgccggtggacggcgcc
ctcaccacctactacaccaacatccagaccggcgtgacgcagggcgcgctgtccttcgcc
agcggcatcgggccggcgcgcgtatatgaagtggccaagtacctcacaagggtggacgtg
ggctccatgtacttcggcagcgttgccgcgaacaagaagttccacgacgccctgcccaag
gaagtgcaggacgccttcgcccaggccggcaaggccacgtccaaggcgcatggccaacac
gtcacgaagacggccaacgccgcgctggacaccatgaaggccgcgggcttgcagatcgcc
gacctgccagcggccgagaaggccaagtgggtcaacggcctgcccaacatcgtgcagccc
tggctgcaggccacgggcgacaagggcaaggccgtgctcaaggcctacttcgacgagctg
cgcgcacacggcgtgaagccgctgcgcgactgggacagccagaaccgctga
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