Hydrogenophaga sp. SNF1: SOM08_12665
Help
Entry
SOM08_12665 CDS
T10669
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
hydr Hydrogenophaga sp. SNF1
Brite
KEGG Orthology (KO) [BR:
hydr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hydr03009
]
SOM08_12665 (dbpA)
Enzymes [BR:
hydr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
SOM08_12665 (dbpA)
Ribosome biogenesis [BR:
hydr03009
]
Prokaryotic type
rRNA helicases
SOM08_12665 (dbpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
AAA_22
CMS1
YlmH_RBD
Motif
Other DBs
NCBI-ProteinID:
WQB81867
LinkDB
All DBs
Position
complement(2659802..2661196)
Genome browser
AA seq
464 aa
AA seq
DB search
MTSASPTAFSALPLSPATLANLEQLGYTAMTPIQAAALPPALLGKDLIAQAKTGSGKTAA
FALALLANLNPRRFAVQALVLCPTRELADQVSTEVRRLARAADNVKVVVLCGGVPLRGQL
ASLEHGAHIVVGTPGRVMDHLGRGSLRLDALNTLVLDEADRMLDMGFFDDIATVARQCPA
ARQTLLFSATYPEGIAQLSARFMREPVTVKVEAQHAGAQIEQRWYEVSETQRLDTVGRLL
AHFRPASALAFCNTKAQCRDLVAVLRAQGIGALALFGELEQRERDQVLVRFANGSCRVLV
ATDVAARGLDIASLAAVINVDVTPDPEVHIHRIGRTGRAGESGLALNLASLDEMGSVGRI
EQLQGQASNWSPVSELVPTGQGPLLPAMATLHIQGGRKEKIRPGDVLGALTADLGYTREQ
VGKINVNDWSTYVAVERGIAQQAASRLNAGRIKGKGVKVRVLED
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgacttccgcttccccgaccgcgttcagcgccctccccctgtcccccgccaccctggcc
aacctggagcagctgggctacacggccatgacgccgatccaggccgccgccctgccgccg
gccctgctgggcaaggacctcatcgcccaggccaagaccggcagcggcaagaccgccgcc
ttcgccctggcgctgctggccaacctgaacccgcgccgcttcgccgtgcaggcgctggtg
ctgtgtcccacgcgcgagctggccgaccaagtgagcaccgaagtccgccgcctcgcgcgc
gcggcggacaacgtgaaggtggtggtgctctgcggcggcgtgccgctgcgcgggcagttg
gcctcgctggagcacggcgcgcacatcgtggtgggcacgccgggccgggtcatggaccac
ctggggcgcggcagcctgcggctggacgcgctcaacaccctggtgctcgacgaggccgac
cgcatgctcgacatgggctttttcgacgacatcgccactgtcgccaggcagtgccccgcg
gcgcgccagaccctgctgttctccgccacctaccccgaaggcatcgcccagctcagcgcg
cgcttcatgcgcgagcccgtcaccgtgaaggtggaggcccagcacgcgggcgcgcagatc
gagcagcgctggtacgaagtgagcgagacccagcgcctggacacggtgggtcgcctgctt
gcccacttccgccccgccagcgcgctggccttctgcaacaccaaggcgcagtgccgcgac
ctggtggccgtgctgcgggcccagggcatcggtgcgctggcgctgttcggggagctggag
cagcgcgaacgcgaccaagtgctggtgcgcttcgccaacggcagctgccgggtgctggtg
gccaccgacgtggccgcgcgcggcctggacatcgccagcctggccgccgtcatcaacgtg
gacgtgacgcccgatcccgaggtgcacatccaccgcatcggccgcaccggccgggcgggc
gaaagcggcctggcgctgaacctggccagcctggacgaaatgggcagcgtgggccgcatc
gagcagctgcaaggccaggcatcgaactggtctcccgtgagcgagctggtgcccaccggc
cagggcccgctgctgccggccatggccaccttgcatatccagggcggccgcaaggaaaag
atccgccccggcgacgtgctgggcgcgctcacggccgacctgggctacacgcgcgaacag
gtcggcaagatcaacgtcaacgactggtccacctatgtcgcggtggagcgcgggatcgcg
cagcaggcggccagccggctgaacgccggccgcatcaaaggcaagggcgtgaaggtgcgc
gtgctggaagactga
DBGET
integrated database retrieval system
