Hydrogenophaga sp. SNF1: SOM08_12700
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Entry
SOM08_12700 CDS
T10669
Symbol
kdsA
Name
(GenBank) 3-deoxy-8-phosphooctulonate synthase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
hydr Hydrogenophaga sp. SNF1
Pathway
hydr00541
Biosynthesis of various nucleotide sugars
hydr01100
Metabolic pathways
hydr01250
Biosynthesis of nucleotide sugars
Module
hydr_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
hydr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
SOM08_12700 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
hydr01005
]
SOM08_12700 (kdsA)
Enzymes [BR:
hydr01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
SOM08_12700 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
hydr01005
]
Lipid A
SOM08_12700 (kdsA)
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GFIT
Motif
Pfam:
DAHP_synth_1
Motif
Other DBs
NCBI-ProteinID:
WQB81874
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Position
complement(2665860..2666717)
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AA seq
285 aa
AA seq
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MKLCGFDVGLDKPFFLIAGPCVIESEQLQMDVAGRLKEITGSLGIPFIFKSSFDKANRSS
GKSFRGPGREAGLAVLAKVKAQLGVPVITDVHSEDDIAPAAAVCDVLQTPAFLCRQTDFI
RAVAQSGRPVNIKKGQFLAPHDMKNVIDKARDAARDAGLPEDSFLACERGASFGYNNLVS
DMRALAIMRETGAPVVFDATHSVQLPGGQGTSSGGQREFVPVLARAAVAVGVSGLFMETH
PDPAKALSDGPNAVPLKHMPALLETLLALDAVTKRNGYLEDRFNA
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgaagctctgcggtttcgacgtcggcctggacaagcccttcttcctcatcgccggcccc
tgtgtcatcgagtccgagcagctgcagatggacgtggccgggcggctgaaggagatcacc
ggctcgctgggcatccccttcatcttcaagagcagcttcgacaaggccaaccgcagcagc
ggcaagagcttccgcggccctggccgcgaggcgggcctggcggtgctggccaaggtcaag
gcccagctcggcgtgcccgtcatcaccgacgtgcacagcgaggacgacatcgcccccgcc
gccgccgtgtgcgacgtgctgcagacgccggccttcctgtgccgccagaccgacttcatc
cgcgccgtggcgcagagcggacggccggtgaacatcaagaagggccagttcctcgcgccg
cacgacatgaagaacgtgatcgacaaggcccgcgacgcggcccgcgacgccggcctgccc
gaggacagcttcctcgcctgcgagcgcggcgcgagcttcggctacaacaacctcgtctcc
gacatgcgggccctggccatcatgcgcgagaccggcgcgccggtggtgttcgacgccacc
cacagcgtgcagctgcccggcgggcaaggcaccagctcgggcggccagcgcgagttcgtg
cccgtgctggcgcgcgccgccgtggcggtcggcgtgtccggcctgttcatggaaacccac
cccgacccggccaaggccttgagcgacggcccgaacgccgtgccgctcaagcacatgccc
gcgctgctcgaaaccctgctcgcgctcgacgccgtgaccaaaaggaacggctacctcgag
gaccgcttcaacgcctga
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