KEGG   Hydrogenophaga sp. SNF1: SOM08_13345
Entry
SOM08_13345       CDS       T10669                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
hydr  Hydrogenophaga sp. SNF1
Pathway
hydr00010  Glycolysis / Gluconeogenesis
hydr00020  Citrate cycle (TCA cycle)
hydr00260  Glycine, serine and threonine metabolism
hydr00280  Valine, leucine and isoleucine degradation
hydr00310  Lysine degradation
hydr00380  Tryptophan metabolism
hydr00620  Pyruvate metabolism
hydr00630  Glyoxylate and dicarboxylate metabolism
hydr00640  Propanoate metabolism
hydr00670  One carbon pool by folate
hydr00785  Lipoic acid metabolism
hydr01100  Metabolic pathways
hydr01110  Biosynthesis of secondary metabolites
hydr01120  Microbial metabolism in diverse environments
hydr01200  Carbon metabolism
hydr01210  2-Oxocarboxylic acid metabolism
hydr01240  Biosynthesis of cofactors
Module
hydr_M00009  Citrate cycle (TCA cycle, Krebs cycle)
hydr_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
hydr_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
hydr_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:hydr00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    SOM08_13345 (lpdA)
   00020 Citrate cycle (TCA cycle)
    SOM08_13345 (lpdA)
   00620 Pyruvate metabolism
    SOM08_13345 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    SOM08_13345 (lpdA)
   00640 Propanoate metabolism
    SOM08_13345 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    SOM08_13345 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    SOM08_13345 (lpdA)
   00310 Lysine degradation
    SOM08_13345 (lpdA)
   00380 Tryptophan metabolism
    SOM08_13345 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    SOM08_13345 (lpdA)
   00670 One carbon pool by folate
    SOM08_13345 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:hydr04147]
    SOM08_13345 (lpdA)
Enzymes [BR:hydr01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     SOM08_13345 (lpdA)
Exosome [BR:hydr04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   SOM08_13345 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox FAD_oxidored HI0933_like FAD_binding_2 AlaDh_PNT_C GIDA Thi4 NAD_binding_8 FAD_binding_3 3HCDH_N
Other DBs
NCBI-ProteinID: WQB81992
LinkDB
Position
2800641..2802059
AA seq 472 aa
MSQQFDVIVIGGGPGGYIAAIRAAQLGFKVACIDEWKNAKGGAALGGTCTNVGCIPSKAL
LQSSEHYEHAGKHFAEHGIEVKGLSLDVGQMLKRKDQVVEQNNKGIEFLFKKNKVAFVHG
RGSFVKAVEGGYEIKAGEESLVGKQVIVATGSNARALPGAPFDEENILSNDGALRVGAVP
KKLGLIGSGVIGLEMGSVWRRLGAEVTILEGLPTFLGAVDEQIAKEAKKAFDKQGLKIEL
GVKVGEVKSGKKGVSIAYANAKGEAQTLEVDKLIVSIGRVPNTIGLNAEGVGLQLDERGA
IVVDGDCRTNLPGVWAVGDVVRGPMLAHKAEEEGVAVAERIAGQHGHVNFNTIPWVIYTS
PEIAWVGETEQQLKARGAAYKAGTFPFMANGRARALGDTTGMVKFLADAATDEILGVHIV
GPMASELISEAVVAMEFKASSEDIARICHAHPSLSEATKEAALAVDKRTLNF
NT seq 1419 nt   +upstreamnt  +downstreamnt
atgagccagcaattcgacgtcatcgtcatcggcggcggccccgggggctacatcgcggcc
atccgcgccgcgcaactgggcttcaaggtggcctgcatcgacgagtggaaaaacgccaag
ggcggtgccgccctgggcggcacctgcaccaacgtgggctgcatcccctccaaggcgctg
ctgcagtcgtccgagcactacgagcacgccggcaagcacttcgccgagcacggcatcgag
gtcaagggcctgagcctggacgtgggccagatgctcaagcgcaaggaccaggtggtcgag
cagaacaacaagggcatcgagttccttttcaagaagaacaaggtggccttcgtccacggc
cgcggctcgttcgtgaaggcggtcgaggggggctacgagatcaaggccggcgaggagagc
ctcgtcggcaagcaggtcatcgtcgccaccggctccaatgcgcgcgcgctgcccggcgcg
cccttcgacgaggagaacatcctttcgaacgacggcgccctgcgcgtgggcgcggtgccc
aagaagctgggcctgatcggctcgggtgtcatcggcctggaaatgggctccgtctggcgc
cgcctgggcgccgaggtgaccatcctcgaaggcctgcccacattcctgggtgcggtggac
gagcagatcgccaaggaagccaagaaggccttcgacaagcagggcctgaagatcgagttg
ggcgtgaaggtcggcgaggtcaagtccggcaagaagggtgtgtccatcgcctacgccaac
gccaagggcgaggcgcagacgctggaggtggacaagctgatcgtctccatcggccgcgtg
cccaacaccatcggcctcaacgccgagggcgtgggcctgcagctcgacgagcgcggcgcc
atcgtggtcgatggcgactgccgcaccaacctgccgggcgtctgggccgtcggtgacgtg
gtgcgcggccccatgctcgcgcacaaggccgaggaagagggcgtggcggtggccgagcgc
atcgcgggccagcacgggcacgtgaacttcaacaccatcccctgggtgatctacaccagc
cccgagatcgcctgggtgggcgagaccgagcagcagctcaaggcccgcggcgccgcctac
aaggccggcaccttccccttcatggccaacggccgcgcgcgcgcgctgggcgacaccact
ggcatggtgaagttcctggccgatgccgcgaccgacgagatcctgggcgtgcacatcgtg
ggccccatggccagcgagctcatctcggaagccgtggtggcgatggagttcaaggccagc
agcgaggacatcgcgcgcatctgccacgcgcacccctcgctgtccgaggcgacgaaggaa
gccgcgctggccgtcgacaagcgcacgctgaacttctga

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