Hydrogenophaga sp. SNF1: SOM08_13345
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Entry
SOM08_13345 CDS
T10669
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
hydr Hydrogenophaga sp. SNF1
Pathway
hydr00010
Glycolysis / Gluconeogenesis
hydr00020
Citrate cycle (TCA cycle)
hydr00260
Glycine, serine and threonine metabolism
hydr00280
Valine, leucine and isoleucine degradation
hydr00310
Lysine degradation
hydr00380
Tryptophan metabolism
hydr00620
Pyruvate metabolism
hydr00630
Glyoxylate and dicarboxylate metabolism
hydr00640
Propanoate metabolism
hydr00670
One carbon pool by folate
hydr00785
Lipoic acid metabolism
hydr01100
Metabolic pathways
hydr01110
Biosynthesis of secondary metabolites
hydr01120
Microbial metabolism in diverse environments
hydr01200
Carbon metabolism
hydr01210
2-Oxocarboxylic acid metabolism
hydr01240
Biosynthesis of cofactors
Module
hydr_M00009
Citrate cycle (TCA cycle, Krebs cycle)
hydr_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
hydr_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
hydr_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
hydr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
SOM08_13345 (lpdA)
00020 Citrate cycle (TCA cycle)
SOM08_13345 (lpdA)
00620 Pyruvate metabolism
SOM08_13345 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
SOM08_13345 (lpdA)
00640 Propanoate metabolism
SOM08_13345 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
SOM08_13345 (lpdA)
00280 Valine, leucine and isoleucine degradation
SOM08_13345 (lpdA)
00310 Lysine degradation
SOM08_13345 (lpdA)
00380 Tryptophan metabolism
SOM08_13345 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
SOM08_13345 (lpdA)
00670 One carbon pool by folate
SOM08_13345 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hydr04147
]
SOM08_13345 (lpdA)
Enzymes [BR:
hydr01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
SOM08_13345 (lpdA)
Exosome [BR:
hydr04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
SOM08_13345 (lpdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
FAD_oxidored
HI0933_like
FAD_binding_2
AlaDh_PNT_C
GIDA
Thi4
NAD_binding_8
FAD_binding_3
3HCDH_N
Motif
Other DBs
NCBI-ProteinID:
WQB81992
LinkDB
All DBs
Position
2800641..2802059
Genome browser
AA seq
472 aa
AA seq
DB search
MSQQFDVIVIGGGPGGYIAAIRAAQLGFKVACIDEWKNAKGGAALGGTCTNVGCIPSKAL
LQSSEHYEHAGKHFAEHGIEVKGLSLDVGQMLKRKDQVVEQNNKGIEFLFKKNKVAFVHG
RGSFVKAVEGGYEIKAGEESLVGKQVIVATGSNARALPGAPFDEENILSNDGALRVGAVP
KKLGLIGSGVIGLEMGSVWRRLGAEVTILEGLPTFLGAVDEQIAKEAKKAFDKQGLKIEL
GVKVGEVKSGKKGVSIAYANAKGEAQTLEVDKLIVSIGRVPNTIGLNAEGVGLQLDERGA
IVVDGDCRTNLPGVWAVGDVVRGPMLAHKAEEEGVAVAERIAGQHGHVNFNTIPWVIYTS
PEIAWVGETEQQLKARGAAYKAGTFPFMANGRARALGDTTGMVKFLADAATDEILGVHIV
GPMASELISEAVVAMEFKASSEDIARICHAHPSLSEATKEAALAVDKRTLNF
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgagccagcaattcgacgtcatcgtcatcggcggcggccccgggggctacatcgcggcc
atccgcgccgcgcaactgggcttcaaggtggcctgcatcgacgagtggaaaaacgccaag
ggcggtgccgccctgggcggcacctgcaccaacgtgggctgcatcccctccaaggcgctg
ctgcagtcgtccgagcactacgagcacgccggcaagcacttcgccgagcacggcatcgag
gtcaagggcctgagcctggacgtgggccagatgctcaagcgcaaggaccaggtggtcgag
cagaacaacaagggcatcgagttccttttcaagaagaacaaggtggccttcgtccacggc
cgcggctcgttcgtgaaggcggtcgaggggggctacgagatcaaggccggcgaggagagc
ctcgtcggcaagcaggtcatcgtcgccaccggctccaatgcgcgcgcgctgcccggcgcg
cccttcgacgaggagaacatcctttcgaacgacggcgccctgcgcgtgggcgcggtgccc
aagaagctgggcctgatcggctcgggtgtcatcggcctggaaatgggctccgtctggcgc
cgcctgggcgccgaggtgaccatcctcgaaggcctgcccacattcctgggtgcggtggac
gagcagatcgccaaggaagccaagaaggccttcgacaagcagggcctgaagatcgagttg
ggcgtgaaggtcggcgaggtcaagtccggcaagaagggtgtgtccatcgcctacgccaac
gccaagggcgaggcgcagacgctggaggtggacaagctgatcgtctccatcggccgcgtg
cccaacaccatcggcctcaacgccgagggcgtgggcctgcagctcgacgagcgcggcgcc
atcgtggtcgatggcgactgccgcaccaacctgccgggcgtctgggccgtcggtgacgtg
gtgcgcggccccatgctcgcgcacaaggccgaggaagagggcgtggcggtggccgagcgc
atcgcgggccagcacgggcacgtgaacttcaacaccatcccctgggtgatctacaccagc
cccgagatcgcctgggtgggcgagaccgagcagcagctcaaggcccgcggcgccgcctac
aaggccggcaccttccccttcatggccaacggccgcgcgcgcgcgctgggcgacaccact
ggcatggtgaagttcctggccgatgccgcgaccgacgagatcctgggcgtgcacatcgtg
ggccccatggccagcgagctcatctcggaagccgtggtggcgatggagttcaaggccagc
agcgaggacatcgcgcgcatctgccacgcgcacccctcgctgtccgaggcgacgaaggaa
gccgcgctggccgtcgacaagcgcacgctgaacttctga
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