Hydrogenophaga sp. SNF1: SOM08_13430
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Entry
SOM08_13430 CDS
T10669
Symbol
der
Name
(GenBank) ribosome biogenesis GTPase Der
KO
K03977
GTPase
Organism
hydr Hydrogenophaga sp. SNF1
Brite
KEGG Orthology (KO) [BR:
hydr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hydr03009
]
SOM08_13430 (der)
Ribosome biogenesis [BR:
hydr03009
]
Prokaryotic type
GTPases
SOM08_13430 (der)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMR_HSR1
KH_dom-like
FeoB_N
GTP_EFTU
Dynamin_N
AIG1
RsgA_GTPase
MeaB
cobW
AAA_22
Roc
ABC_tran
Ras
SRPRB
Motif
Other DBs
NCBI-ProteinID:
WQB82008
LinkDB
All DBs
Position
2817887..2819227
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AA seq
446 aa
AA seq
DB search
MKPVVALVGRPNVGKSTLFNRLTGTRDAIVADLAGLTRDRHYGNGRLGKREYIIVDTGGF
EPDAGEGSIYREMAQQTRQAVAESDVVLFVVDARAGLSAQDHDIANYLRRLGKPCVLVAN
KAEGMTQGAQLVEFFELGLGEVLPVSGAHGQGVRSMIETALDQVPGLAEDEEGEAEDNTG
TIRLTVAGRPNVGKSTLINAWLGEERLVAFDMPGTTRDAISVPFERNGQRFELVDTAGLR
RKGRVFEAIEKFSVIKTLQAIENANVVLLLLDATQGVTDQDAHIAGYILESGRAVVVAIN
KWDAIDSYQREQLERQIENRLAFLKFAALHRISAKKRQGLAPLWASIAQAHASAMRKMPT
PVLTRLLQEAVAFQAPSRGGQARPKMRYAHQGGMNPPVIVIHGNSLDRVPDAYRRFLEGR
FRKAFDLVGTPLRIEFRTSSNPFKAE
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgaaacccgtcgtcgcgctcgtgggccgccccaacgtgggcaagtccaccctgttcaac
cgcctcacgggcacacgcgacgccatcgtggccgacctggccggcctcacgcgcgaccgc
cactacggcaatggccgcctgggcaaacgtgagtacatcatcgtcgacaccggcggcttc
gagcccgacgccggcgagggcagcatctaccgtgaaatggcgcagcagacgcgccaggcc
gtggccgaaagcgacgtggtgctcttcgtggtcgatgcgcgcgccggcctgagcgcgcag
gaccacgacatcgccaactacctgcgccgcctgggcaagccctgcgtgctggtggccaac
aaggccgagggcatgacccagggcgcccagctggtggagttcttcgaactcggcctgggc
gaggtgctgcccgtgtcgggcgcgcacgggcagggcgttcgctccatgatcgagaccgcc
ctcgaccaggtccccggcctggccgaggacgaagagggcgaggccgaggacaacaccggc
accatccgcctgaccgtggcgggccgccccaacgtcggcaaatccacgctgatcaatgcc
tggcttggcgaggagcgcctggtcgctttcgacatgcccggcaccacgcgcgacgccatc
agcgtgcccttcgaacgcaatggccaacgcttcgagctggtcgacacggccggcctgcgc
cgcaagggccgcgtgttcgaggcgatcgagaagttctccgtcatcaagacgctccaggcc
atcgagaacgccaacgtcgtgctgctgctgctcgatgccacccagggcgtgaccgaccag
gacgcccacatcgcgggctacatcctggagagtggccgcgccgtggtggtggccatcaac
aaatgggacgcgatcgacagctaccagcgcgagcagctggagcgccagatcgaaaaccgc
ctggcgttcctcaagttcgccgcgctgcaccgcatttcagcgaagaagcgccagggcctg
gcgccgctgtgggcttccatcgcccaggcgcacgcctcggccatgcgcaagatgcccacc
ccggtgctgacccgcctgctgcaggaggcggtggccttccaggcgccgtcgcgtggcggc
caggcccggcccaagatgcgctacgcccaccagggcggcatgaaccccccggtgatcgtc
atccacggcaactcgctggaccgggtgcccgacgcctaccggcgcttcctggaggggcgt
ttccgcaaggccttcgacctcgtcggcaccccgctgcgcatcgagttcaggacctcgagc
aaccctttcaaggccgaatga
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