Hydrogenophaga sp. SNF1: SOM08_14320
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Entry
SOM08_14320 CDS
T10669
Name
(GenBank) TRAP transporter large permease
KO
K11690
TRAP-type transport system large permease protein
Organism
hydr Hydrogenophaga sp. SNF1
Pathway
hydr02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
hydr00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SOM08_14320
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hydr02000
]
SOM08_14320
Transporters [BR:
hydr02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
SOM08_14320
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DctM
Motif
Other DBs
NCBI-ProteinID:
WQB82173
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Position
3004568..3005869
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AA seq
433 aa
AA seq
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MDRDLVALLGFVGMFALMALRVPIGVAMGIAGVAGFAALSGLTPGLNLLANVPLSVLTDY
NLIVIPMFILMGAFASHSGMSAELFAAGRAWLHHRRGGLALASVAACGGFSAINGSSVAT
AATMTQVALPEMRRAGYEPGISAGLIAAGGTLGIMIPPSVILVLYGIMTEVDITALFAAG
VIPGLMAVIFYSLVVAIIARVKPEWMPRGERHGWAERFASLRPLWAVVVLFVFVLGGIYG
GLFTVQEAAGVGATGTLVIGMARGRLRWPQIKEALISALRVSSAIMTIVVGAYLFGYFLT
ITQFTQNAVEFLVNLPIGPYGVLALIMLGYLVLGAVMDELAMLLLTVPIVFPAMVHLGFD
PVWFGVIVVMAVTFGMICPPVGMNVFVINSIARDLSLGHIYRGTMPFIAADVVRLFILCA
FPSLSLWLPGLLA
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atggatcgtgacctggtggccctgctgggcttcgtcggcatgttcgcgctgatggcgctg
cgcgtgcccatcggcgtggccatgggcattgcgggcgtggcgggcttcgccgcgctcagc
ggcctcacgcccggcctgaacctgctggccaatgtgccgctgtcggtgctgaccgactac
aacctcatcgtcatcccgatgttcatcctgatgggggccttcgcctcgcattcgggcatg
agcgccgagctgttcgcggccggccgcgcctggctgcaccaccgccgcggtggcctggcg
ctggcctcggtggcggcctgtggcggcttctcggccatcaatggttcgtcggtggccacg
gccgccacgatgacgcaggtggcgctgcccgagatgcgccgcgccggctacgagcccggc
atttcggccggcctcatcgcggccggcggcacgctgggcatcatgatcccgccctcggtg
atcctggtgctctacggcatcatgaccgaggtggacatcaccgcgctgttcgcggccggg
gtgataccgggcctgatggcggtgatcttctactcgctggtggtggccatcatcgcccgc
gtgaagcccgagtggatgccgcggggcgagcgccacggctgggccgagcgattcgccagc
ctcaggccgctgtgggccgtggtcgtgctcttcgtgttcgtgctcggcggcatctacggc
ggcctgttcacggtgcaggaggcggcgggcgtgggcgccacgggcacgctggtgatcggc
atggcgcgcgggcgcctgcgctggccgcagatcaaggaggcgctgatcagcgcgctgcgc
gtgtcctcggccatcatgaccatcgtcgtcggcgcctacctgttcggctacttcctcacc
atcacccagttcacccagaacgcggtggaattcctggtgaacctgccgatcgggccctat
ggcgtgctggcgctcatcatgctgggctacctggtcctgggcgcggtgatggacgaactg
gccatgctgctgctcacggtgcccatcgtgtttcccgcgatggtgcacctgggcttcgac
ccggtctggttcggcgtgatcgtggtgatggcggtgaccttcggcatgatctgcccgccc
gtgggcatgaacgtgttcgtcatcaattccattgcgcgcgacctgtcgctgggacacatc
taccggggcaccatgccgttcatcgcggcggacgtggtccggctgttcatcctctgcgcc
ttcccctcgctctcgctctggctgcccggcctgctggcctag
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