Hydrogenophaga sp. SNF1: SOM08_14720
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Entry
SOM08_14720 CDS
T10669
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
hydr Hydrogenophaga sp. SNF1
Pathway
hydr03030
DNA replication
hydr03430
Mismatch repair
hydr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hydr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SOM08_14720
03430 Mismatch repair
SOM08_14720
03440 Homologous recombination
SOM08_14720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hydr03032
]
SOM08_14720
03400 DNA repair and recombination proteins [BR:
hydr03400
]
SOM08_14720
Enzymes [BR:
hydr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SOM08_14720
DNA replication proteins [BR:
hydr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SOM08_14720
DNA repair and recombination proteins [BR:
hydr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SOM08_14720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
SprT-like
AAA
QueC
Motif
Other DBs
NCBI-ProteinID:
WQB82251
LinkDB
All DBs
Position
3084953..3085960
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AA seq
335 aa
AA seq
DB search
MSDTALAPWLQRQLRTLLGWRAHAVLLSGPSGLGQYELGLALARAWLCERPQPHGACGQC
PSCHAIDVRTHADLCALLPETLSLERGWPLDESTQRELDDKKRKPSKAIRVEAARQAVAF
TQTTSARGGTQVVLVYPAERLNVEAANTLLKTLEEPSPSVRFVLATEAAHLLLPTIRSRC
QTHTLQWPAEAEALPWLQATGEVTPTAAEAWWRASGGRPDEALALSRRGFTPEQWAGLPQ
ALARGDWKVLGEQTPAAQLDVLQKLCHDLMARAAGAAPRFFPAEQLPPPPPWRVLARWSD
ELAQAARSVEHPYQAGLLQEAWAARARQALATARR
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgagcgataccgccctggccccctggctgcaacgccagctgcgcaccctgctgggctgg
cgcgcccacgcggtgctgctgtccgggccgtccggcctgggccagtacgagctgggcctg
gccctggcccgcgcctggttgtgcgagcggccccagccgcacggcgcctgtgggcagtgt
ccgagctgccacgccatcgacgtgcgcacgcacgccgacctgtgcgcgctgctgcccgaa
accctgagcctggagcggggctggccgctggacgagtccacccagcgcgagctcgacgac
aagaaacgcaagcccagcaaagccattcgcgtggaggccgcgcgccaggccgtggccttc
acccagaccaccagtgcgcgcggcggcacccaggtggtgctggtctacccggccgagcgg
ctcaacgtcgaggccgccaacaccctgctcaagaccctggaagagcccagccccagcgtg
cgcttcgtgctggccaccgaggccgcgcacctgctgctgcccaccatccgcagccgctgc
cagacgcacaccctgcaatggcccgctgaggccgaggccttgccctggctgcaggccacc
ggcgaggtgacgccgaccgccgccgaggcgtggtggcgcgcgtccggtggccggcccgac
gaggccttggcgctgtcgcggcgtggtttcacgcccgagcaatgggccggcctgccgcag
gccctggcgcgcggcgactggaaggtgctgggcgagcagacgcccgcggcccagctcgac
gtgctgcaaaagctctgccacgacctcatggcgcgcgcggccggcgccgcgccgcgcttc
ttcccggccgagcaactgccgccgccgccgccctggcgcgtgctggcgcgctggtccgac
gaactcgcgcaggcggcccgcagcgtggagcacccttatcaggccggcttgctgcaggag
gcctgggccgcgcgggcgcgtcaggccctggcgaccgctcgtcgctga
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