Hydrogenophaga sp. SNF1: SOM08_15530
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Entry
SOM08_15530 CDS
T10669
Symbol
nirB
Name
(GenBank) nitrite reductase large subunit NirB
KO
K26139
nitrite reductase [NAD(P)H] large subunit [EC:
1.7.1.4
]
Organism
hydr Hydrogenophaga sp. SNF1
Pathway
hydr00910
Nitrogen metabolism
hydr01100
Metabolic pathways
hydr01120
Microbial metabolism in diverse environments
hydr01310
Nitrogen cycle
Module
hydr_M00531
Assimilatory nitrate reduction, nitrate => ammonia
hydr_M00615
Nitrate assimilation
Brite
Enzymes [BR:
hydr01000
]
1. Oxidoreductases
1.7 Acting on other nitrogenous compounds as donors
1.7.1 With NAD+ or NADP+ as acceptor
1.7.1.4 nitrite reductase [NAD(P)H]
SOM08_15530 (nirB)
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Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
NIR_SIR
Fer2_BFD
Pyr_redox
Rubredoxin_C
NIR_SIR_ferr
Pyr_redox_3
DAO
NAD_binding_7
Lys_Orn_oxgnase
GIDA
AlaDh_PNT_C
3HCDH_N
Motif
Other DBs
NCBI-ProteinID:
WQB82403
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Position
3242014..3244515
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AA seq
833 aa
AA seq
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MDMRAQPRQRMKLVMVGNGMAGVRTLEELLKLAPDLYDITVFGAEPHPNYNRILLSPVLA
GEQTLEQIVLNDWAWYRDNGVTLHAGCQVTEVDRVKRQVHARNAAGETLSAPYDRLILAT
GSKPFILPLPGKELEGVLAYRDIADTQAMIDAAAKYRHAVVIGGGLLGLEAANGLMKRGM
AVSVVHVAPWLMERQLDEEAGRLLQQSLQSRGMDFLIGAQTQALVGDRDGGAGGRVKAVR
FQDGREVPADLVVMAVGIRPNTALAESMKLHVERGIVVGDTLQTVTDPRIYAVGECAAHR
GIAYGLVAPLFEQGKVLATHLAEFGIGRYTGSLTSTKLKVTGIDLFSAGQFMGGEGTEEI
VMSDPGGGVYKKLVIRDDKLVGACLYGDTVDGSWYFKLLREGRSVADIRDKLMFGESNIG
DTGHEGHHKAAAMPDTAEVCGCNGVSKGAICKAIKDKGLFTLDEVRRHTKASASCGSCTG
LVEQILMATAGGDYSAAPKLKALCGCTEHGHQAVREAIRHHKYLSTAEVFAGLGWRTPNG
CATCRPAVNYYLISTWPKEAQDDPQSRFINERSHANIQKDGTYSVIPRMWGGETTAAELR
RIADVVDKYRIPTVKVTGGQRIDLLGVKKEDLPSVWRDLAMPSGHAYAKALRTVKTCVGS
EWCRMGTQDSTQMGKDLERAMWRMYAPHKVKFAVSGCPRNCAEAGIKDVGIIGVDSGWEM
VIAGNGGIKTEVAQFLVKLKTAEEVLEYTGAFMQLYRLEGWYLERTVHYVARVGIDHVRR
RILDDAEGRKALWAELQAALDGEPDPWFEHEKAALDTRQFIPIQPLTVEGSAA
NT seq
2502 nt
NT seq
+upstream
nt +downstream
nt
atggacatgcgcgcccagccgcggcaaaggatgaaactggtgatggtgggcaacggcatg
gccggcgtgcgcacgctggaggagctgctcaagctcgcccccgacctctacgacatcacg
gtgttcggcgccgagccgcacccgaactacaaccgcatcctgctctcgccggtgctcgcg
ggcgagcagacgctggagcagatcgtgctcaacgattgggcctggtaccgggacaacggc
gtcaccctgcacgcgggctgccaggtgaccgaagtggaccgcgtcaagcgccaggtgcac
gcgcgcaacgccgcgggcgaaacgctcagcgcgccctacgaccgcctgatcctggccacc
ggctccaagcccttcatcctgcccctcccgggcaaggagctcgagggcgtgctggcctac
cgcgacatcgccgacacccaggccatgatcgacgccgccgcgaagtaccggcacgcggtg
gtcatcggcggcggcctgctgggcctggaggccgccaacgggctgatgaagcgcggcatg
gccgtgagcgtggtgcatgtggcgccctggctcatggaacgccagctcgacgaggaggcc
ggccgcctgctgcagcaatcgctgcaatcgcgcggcatggacttcctcatcggcgcgcag
acgcaggcgctcgtcggcgaccgcgacggcggcgcgggcggccgcgtgaaggccgtgcgc
ttccaggacggccgcgaggtccccgccgacctggtggtcatggccgtgggcatccgcccc
aacaccgcgctggccgagtccatgaagctgcacgtcgagcgcggcatcgtcgtcggcgac
accctgcagaccgtcaccgacccgcgcatctacgccgtgggcgagtgcgccgcgcaccgc
ggcatcgcctacgggctggtggcgccgctgttcgagcagggcaaggtgctggccacgcac
ctggccgagttcggcatcggccgctacaccggctcgctcacctccaccaagctcaaggtc
acgggcatcgacctgttctcggccggccagttcatgggcggcgagggcaccgaggagatc
gtcatgagcgaccccggcggcggcgtctacaaaaagctggtgatccgggacgacaaactg
gtgggcgcctgcctgtacggcgacaccgtggacggcagctggtacttcaagctgctgcgc
gagggccgcagcgtggccgacatccgcgacaaactgatgttcggcgaatccaacatcggc
gacaccgggcacgaaggccaccacaaggccgccgccatgccggacacggccgaggtctgc
ggctgcaacggcgtcagcaagggcgccatctgcaaggccatcaaggacaagggcctgttc
acgctggacgaggtgcgccggcacaccaaggccagcgccagctgcggctcctgcaccggc
ctggtggagcagatcctgatggccaccgccggcggcgactactcggccgcgccgaagctc
aaggccctgtgcggctgcaccgagcacggccaccaggcggtgcgcgaggccatccgccac
cacaagtacctcagcaccgccgaggtcttcgccggcctgggctggcgcacgcccaacggt
tgcgccacctgccgcccggccgtgaactactacctcatcagcacctggcccaaagaagcc
caggacgacccgcagagccgcttcatcaacgagcgcagccacgccaacatccagaaggac
ggcacctacagcgtgatcccgcgcatgtggggcggcgagaccacggcggccgagctgcgc
cgcatcgccgacgtggtggacaagtaccggatccccaccgtcaaggtcacgggcggccag
cgcatcgacctgctcggcgtgaaaaaggaagacctgccatcggtctggcgcgacctggcc
atgcccagcggccacgcctacgccaaggcgctgcgcaccgtgaagacctgcgtgggcagc
gagtggtgccgcatgggcacgcaggacagcacgcagatgggcaaggacctggagcgcgcc
atgtggcgcatgtacgcgccgcacaaggtgaagttcgccgtcagcggctgcccgcgcaac
tgcgccgaggccggcatcaaggacgtgggcatcatcggcgtggactcgggctgggagatg
gtcatcgccggcaacggcggcatcaagaccgaggtggcgcagttcctggtcaagctcaag
accgccgaggaggtgctggagtacaccggcgccttcatgcagctctaccgcctggaaggt
tggtacctggagcgcaccgtgcactacgtggcgcgcgtgggcatcgaccacgtcaggcgg
cgcatcctcgacgacgccgagggccgcaaagcgctgtgggccgagctgcaggccgcgctc
gacggcgagcccgacccctggttcgagcacgagaaggccgcgctggacacgcgccagttc
attcccattcagcccctgaccgtggaaggaagcgccgcatga
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