Hydrogenophaga sp. SNF1: SOM08_16080
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Entry
SOM08_16080 CDS
T10669
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
hydr Hydrogenophaga sp. SNF1
Brite
Enzymes [BR:
hydr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
SOM08_16080 (truA)
Transfer RNA biogenesis [BR:
hydr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SOM08_16080 (truA)
Prokaryotic type
SOM08_16080 (truA)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
PD40
Motif
Other DBs
NCBI-ProteinID:
WQB85934
LinkDB
All DBs
Position
3359273..3360061
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AA seq
262 aa
AA seq
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MLRIALGVSFNGRGYDGWQSQPSGNTVQDKLEAALAQFCALPAVSTLCAGRTDAGVHGLM
QVVHFDTPLHRDEYAWVRGTNSFLPPDVAVQWAREVPAAFHARASAIARRYAYVLLESPV
RPSVEQGQVGWVFRPLNLEAMRQAAASLIGEHDFTSFRASQCQAHTPVKALRRIEIARRG
AYWRFEFEANAFLHHMIRNIMGCLIAIGSGNRPPGWMAEVLAARSRDAAAPTFSPDGLYF
LGPVYDAAWGLPERTPAFDWLP
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgctccgcatcgcgctgggcgtgagctttaacggccgcggctacgacggctggcagagc
cagcccagcggcaataccgtccaggacaagctggaagccgcgctcgcccagttctgcgcc
ctgcccgccgtgagcaccctgtgcgcgggccgcaccgacgcaggcgtgcacgggctcatg
caggtggtgcacttcgacacccccctgcaccgcgacgaatacgcctgggtgcgtggcacc
aacagcttcctgccgcccgacgttgccgtgcaatgggcgcgggaagtgcccgcggccttc
cacgcccgcgccagcgccatcgcgcggcgctacgcctacgtgctgctcgagtcgcccgtg
cggcccagcgtggagcagggccaagtgggctgggtgttccgaccgctcaatctcgaggcg
atgcgccaggccgccgcctcgctcatcggcgagcacgacttcacctctttccgcgcctcg
caatgccaggcgcacacgccggtgaaggcgctgcggcgcatcgagatcgcccggcgcggt
gcctactggcgcttcgagttcgaggccaatgccttcctgcaccacatgatccgcaacatc
atgggctgcctcatcgccatcggcagcggcaaccgcccgcccgggtggatggccgaggtg
ttggccgcgcgcagccgcgacgccgcggcgcccaccttctcccccgacggcctgtacttt
ctcgggccggtctacgatgccgcctggggcctgcccgaacgcacgccggccttcgactgg
ctgccctag
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