Hydrogenophaga sp. SNF1: SOM08_16155
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Entry
SOM08_16155 CDS
T10669
Name
(GenBank) DegQ family serine endoprotease
KO
K04771
serine protease Do [EC:
3.4.21.107
]
Organism
hydr Hydrogenophaga sp. SNF1
Pathway
hydr01503
Cationic antimicrobial peptide (CAMP) resistance
hydr02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
hydr00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SOM08_16155
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
SOM08_16155
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
hydr01002
]
SOM08_16155
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
hydr03110
]
SOM08_16155
Enzymes [BR:
hydr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.107 peptidase Do
SOM08_16155
Peptidases and inhibitors [BR:
hydr01002
]
Serine peptidases
Family S1: chymotrypsin family
SOM08_16155
Chaperones and folding catalysts [BR:
hydr03110
]
Other chaperones and cochaperones
DegP / HtrA
SOM08_16155
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Trypsin_2
PDZ_2
PDZ_6
Trypsin
PDZ
PDZ_Tricorn
Peptidase_S46
Pept_S41_N_bact
Peptidase_S31
Peptidase_S29
Motif
Other DBs
NCBI-ProteinID:
WQB82521
LinkDB
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Position
complement(3373038..3374525)
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AA seq
495 aa
AA seq
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MSVARLRPSLQALALAAAFGAAGSLALLTPTPSLAQAAATNARGLPDFTDLVDLVGPSVV
NIRTLERAAARGNAEGGPDEEMLEFFRRFGIPIPPGVTPRGPRQGPPSDEARPRGVGSGF
VLSADGFIMTNAHVVDGADELIVTLADKREFKARIVGADARTDVAVVKIEATGLAPVKVG
DINRLRVGEWVMAIGSPFGLENTVTAGIVSAKQRDTGDYLPFIQTDVAINPGNSGGPLIN
MRGEVVGINSQIYSRSGGFQGISFAIPIDEAVRVSNELRASGRVTRGRIGVRIDQVGKEV
AESLGMAQPKGALVRGVEPDSPAAKAGVEPGDIILKFDGKEIDKSVDLPRLVGNTKPGTR
STMTVLRRGSQRELNVVIAELEPERPEARAATPEPKPVPSNNATQSLGLTLAELGADDAK
ALKVKGGVRVIGVTGPATRAGLREGDVIVAVANTEVSSVKDVEAVLAKLDKSKPVNLLLR
RGEWAQYAVVRPQLR
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgtccgttgcccgactccgtccctccctgcaagccctggccctggccgccgccttcggt
gcggccgggtcgctggccttgctcacgccgaccccctcgctcgcccaggcggccgcgacc
aacgcgcgcggcctgccggatttcaccgacctcgtcgacctggtcggcccgtcggtggtc
aacatccgcacgctcgagcgcgccgcggcgcgcggcaatgccgagggcggccccgacgag
gagatgctggagttcttccgccgcttcggcattccgatccccccgggcgtgacgccgcgc
ggcccgcgccagggcccgccgtccgacgaggcgcgcccgcgcggcgtgggctcgggcttc
gtgctcagcgccgacggcttcatcatgaccaacgcccatgtcgtggacggcgccgatgag
ctgatcgtcacgctggcggacaagcgcgaattcaaggcccgcatcgtcggcgccgatgcg
cgcaccgacgtggcggtggtgaagatcgaggccaccggcctggcgccggtgaaggtgggc
gacatcaaccgcctgcgcgtgggcgaatgggtgatggcgatcggctcgcccttcggcctg
gagaacaccgtcacggccggcatcgtgagcgccaagcagcgcgacacgggcgactacctg
cccttcatccagaccgacgtggccatcaacccgggcaactcgggcgggccgctgatcaac
atgcgcggcgaggtcgtgggcatcaacagccagatctactcgcgctcgggcggcttccag
ggcatctccttcgccattcccatcgacgaggccgtgcgtgtgtccaacgagctgcgcgcc
agcgggcgcgtcacgcgcgggcgcatcggcgtgcgcatcgaccaggtgggcaaggaagtg
gccgagtcgctgggcatggcgcagcccaagggcgcgctggtgcgtggcgtcgagcccgac
tcgccggccgcgaaggcgggcgtcgagccgggcgacatcatcctcaagttcgatggcaag
gagatcgacaagtcggtcgacctgccgcgcttggtgggcaacaccaagccgggcacgcgc
agcaccatgacggtgttgcgccggggcagccagcgcgagctgaacgtggtgatcgccgag
ctcgagcccgagcgccccgaggcgcgtgccgccacccccgagcccaagcccgtgccgagc
aacaacgccacgcagtcgctgggcctgacgctggccgaactcggcgcggacgatgccaag
gcgctcaaggtcaagggcggcgttcgcgtgatcggcgtcaccggccccgccacccgggcc
ggcctgcgcgaaggcgacgtgatcgtggcggtggccaacaccgaggtgtcctcggtcaag
gacgtggaggccgtgctcgccaagctggacaagtccaagccagtgaatctgctgctgcgc
cggggcgaatgggcgcagtacgcggtggtgcgcccgcagcttcggtga
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