Hydrogenophaga sp. SNF1: SOM08_16855
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Entry
SOM08_16855 CDS
T10669
Name
(GenBank) valine--tRNA ligase
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
hydr Hydrogenophaga sp. SNF1
Pathway
hydr00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
hydr00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SOM08_16855
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
hydr01007
]
SOM08_16855
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hydr03016
]
SOM08_16855
Enzymes [BR:
hydr01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
SOM08_16855
Amino acid related enzymes [BR:
hydr01007
]
Aminoacyl-tRNA synthetase
Class I (U)
SOM08_16855
Transfer RNA biogenesis [BR:
hydr03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
SOM08_16855
Prokaryotic type
SOM08_16855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
Val_tRNA-synt_C
tRNA-synt_1g
tRNA-synt_1_2
Motif
Other DBs
NCBI-ProteinID:
WQB82654
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All DBs
Position
3506306..3509185
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AA seq
959 aa
AA seq
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MTDTVQQPGLASLAKSFEPAPIEARWGPWWEQRGVGKAGFRGTGEAQAGAPAFSIQLPPP
NVTGTLHMGHAFNQTIMDSLTRYHRMMGANTLWVPGTDHAGIATQIVVERQLQEQGVKRH
DLGREAFTQKVWQWKEKSGDTITTQMRRMGDTVDWSREYFTMDPALSAVVTETFVRLYEQ
GLIYRGKRLVNWDPVLKSAVSDLEVESEEEDGFLWHIRYPLADGSGSVVVATTRPETMLG
DSAVMVHPGDERYAALVGKKVRLPLSDREIPVIADDYVDAAFGTGVVKVTPAHDHNDYAV
GQRHGLPQIGVLTLDAAINQNAPEKYRGLDRFEARKAVVADLEALGLLVETKKHKLMVPR
CARTGQVVEPMLTDQWFVAMTKVSEQDPSGKSIAQKAIDAVDSGEVKFVPENWVNTYDQW
MKNIQDWCISRQLWWGHQIPAWYDEDGRVYVARSEADAQAQAPGKTLTRDPDVLDTWYSS
ALVPFSTMGWPNQKSGPTEDYDVYLPSSVLVTGYDIIFFWVARMIMMTTHFTGRVPFRHV
YIHGLVRDAQGRKMSKSEGNVLDPVDLIDGIALAPLLDKRTTGLRKPETAPRVRKDTEKE
FPEGIPAYGADALRFTFAALASLGRSINFDSKRCEGYRNFCNKLWNATRFVLMNCEGQDC
GLEEHTKAECAVGQPFHGYLSFSQADRWISSTLQRTEATVAQGFAEYRLDNVANAIYDFV
WNEFCDWYLEIAKVQIQTGDAAQQRATRRTLIRTLEAIQRLAHPIIPFITEELWQKVAPV
AGRAGESVALAAYPVSQPERIDEAAEAHVARLKKLVDACRTLRGEMGVSPAQRLPLYAVG
DAAFLRGAAPVLQSLAKLAEVRVFDDEAAWAQAAGAAPVAVVGDARLCLFMAIDVAAEKV
RLGKEAARLQGEIAKAQGKLGNEGFVARAPAAVIEQEKQRLADFGATLEKVKAQLARLG
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacaccgtgcagcaacccggcctggcctcgctggccaagtccttcgaacccgcc
cccatcgaagcccgctggggcccctggtgggagcagcgcggcgtaggaaaggccgggttc
cgcggcaccggcgaggcccaggccggcgcgccggccttctccatccagctgccgccgccg
aacgtgaccggcaccctgcacatgggccacgcgttcaaccagaccatcatggacagcctc
acgcgctaccaccgcatgatgggcgcgaacacgctgtgggtgccgggcaccgaccacgcg
ggcatcgccacccagatcgtggtcgagcgccagctgcaggaacagggcgtcaagcgccac
gacctcggccgcgaggccttcacgcagaaggtctggcagtggaaggaaaagagcggcgac
accatcaccacgcagatgcgccgcatgggcgacaccgtggactggtcgcgcgagtacttc
accatggaccccgcgctctcggccgtggtgaccgagaccttcgtgcgcctgtacgagcag
ggcctcatctaccgcggcaagcgcctggtcaactgggacccggtgctcaagtcggcggtg
agcgacctggaggtggagagcgaggaggaagacggcttcctctggcacatccgctacccc
ctggccgacggcagcggttcggtggtggtggccaccacgcgccccgaaaccatgctgggc
gacagcgccgtcatggtgcaccccggcgatgagcgctacgccgccctcgtcggcaagaag
gtccggctgccgctgtccgatcgcgagatccccgtgatcgccgacgactacgtggacgcc
gccttcggcaccggggtggtgaaggtcacccctgcgcacgaccacaacgactacgccgtc
ggccagcgccacggcctgccccagatcggcgtgctcaccctggacgcggccatcaatcag
aacgcccccgagaagtaccgcggcctcgaccgcttcgaggcccgcaaggccgtggtggcc
gacctcgaggccctgggcctgctggtcgagaccaagaagcacaagctcatggtgccgcgc
tgcgcgcgcaccggccaggtggtggagcccatgctcaccgaccagtggttcgtggccatg
accaaggtcagcgagcaggaccccagcggcaagagcatcgcgcagaaggcgatcgacgcc
gtcgactcgggcgaggtgaagttcgtgcccgagaactgggtcaacacctacgaccagtgg
atgaagaacatccaggactggtgcatcagccgccagctctggtggggccaccagatcccc
gcctggtacgacgaggacggtcgcgtctacgtggcgcgcagcgaggccgatgcccaggcc
caggccccgggcaagaccctcacgcgcgaccccgacgtgctggacacctggtactcgtcc
gcgctggtgcccttcagcaccatgggctggccgaaccagaagagcggccccaccgaagac
tacgacgtctacctgcccagcagcgtgctggtgacgggctacgacatcatcttcttctgg
gtcgcgcgcatgatcatgatgacgacccacttcacgggtcgcgtgccgttccgccacgtc
tacatccacggcctggtgcgcgacgcccagggccgcaagatgagcaagagcgaaggcaac
gtgctcgacccggtggacctgatcgacggcatcgccctggcgccgctgctggacaagcgc
accaccggcctgcgcaagcccgagaccgcgccgcgcgtgcgcaaggacaccgagaaggag
ttccccgagggcattcccgcctacggcgccgacgcgttgcgcttcaccttcgcggccctg
gcctcgctgggccgcagcatcaacttcgacagcaagcgctgcgagggctaccgcaacttc
tgcaacaagctctggaacgccacgcgcttcgtgctgatgaattgcgagggccaggactgc
ggcctcgaagagcacaccaaggccgaatgcgccgtcgggcagcccttccacggctacctc
agcttcagccaggccgaccgctggatcagctcgacgctgcagcgcaccgaggccaccgtg
gcccagggcttcgccgagtaccgcctggacaacgtcgccaacgccatctacgacttcgtc
tggaacgagttctgcgactggtacctggagatcgccaaggtgcagatccagaccggcgac
gccgcgcagcagcgcgccacgcgccgcaccctgatccgcacgctggaggcgatccagcgc
ctggcccaccccatcattcccttcatcaccgaagagctgtggcagaaggtggcgccggtg
gccgggcgggccggcgaatcggtggcgctggccgcctacccggtgagccagcccgagcgc
atcgacgaggccgccgaagcccacgtggcgcgcctgaagaagctggtggacgcctgccgc
acgctgcgcggcgagatgggcgtgtcaccggcccagcgcctgccgctctacgccgtgggc
gacgccgccttcctgcgcggtgccgcgccggtgctgcagtcgctggccaagctggccgag
gtgcgcgtgttcgacgacgaggccgcctgggcccaggccgcgggcgccgcgcccgtggcg
gtggtgggcgacgcccgcctgtgcctgttcatggccatcgacgtcgcggccgagaaggtc
cgcctgggcaaggaagccgcccgcctgcagggtgagatcgccaaggcccagggcaagctg
ggcaacgagggcttcgtggcgcgcgcgccagcggcggtgatcgagcaggaaaaacagcgc
ctggccgacttcggcgccacgctggagaaggtgaaggcccagttggcgcgcctgggctga
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