Hydrogenophaga sp. SNF1: SOM08_17030
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Entry
SOM08_17030 CDS
T10669
Name
(GenBank) translocation/assembly module TamB domain-containing protein
KO
K09800
translocation and assembly module TamB
Organism
hydr Hydrogenophaga sp. SNF1
Brite
KEGG Orthology (KO) [BR:
hydr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hydr02000
]
SOM08_17030
Transporters [BR:
hydr02000
]
Other transporters
Pores ion channels [TC:
1
]
SOM08_17030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TamB
Motif
Other DBs
NCBI-ProteinID:
WQB82683
LinkDB
All DBs
Position
3536101..3540192
Genome browser
AA seq
1363 aa
AA seq
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MAEPPRPLPPPVAPPPAPRWPGAAGWFGRALVWLFGALAGAGLAGALLLGAWAASEGSLA
QALRWGLAWQAEKAPEAGRIEAEGVSGSLIGGGQVQALGWSRDGLSVQAEGLRLRLGGLF
WLGLLRRDLLVSELHAARVRVTDQRPPAPPSPTEPLQSLVLPIDIEANLSVDELLLPGQA
PLALRALDARYRYGRAEPGLGTEQAHTLLLRSLQWAEGRYSAQATLGAQAPMPLRLQAEG
ELRAEVPEGGRLDLRARATAQGPLAGADAALNLVAQIEPQGRTEATPTLAGTARLRPWAP
QPLAEADLRLFRLNLALLWPQAPTTALTGTAQARPDGADWRARLALNNEAAGPLDQRRLP
LESIDAEVVQSGARWTLERLDAAVAGGRVRAEGRRDAPAEGAASAWGDWRGQLRASGLNP
ALAWSALAPAALDARVDARAVDPNAARPAIDIDARVAPAGRQPRRSAAEAWRLRELLLQG
RWQPGDTPGQGQFTVRQARLDALDGVLNAQGRIDTARPLAEGSLDATLPGLRARWSGLLA
HAQGQGELNLDLADGARLLAWVRALGEVPLLGEHLKPALAALADGQAEGQAQARLRWQGG
LGAFGFPGPGRAAAPRLDLSLGTERLRLARGGDAPLALELGATRLTVQGPPEALAVALRT
RAEASGWRAELDTAGELGFIGRPLDARRGQLALSRLALSATPAGNGQGAGRATSGGNGGA
VSWALTSDSPLRARWQPRGEAIDAELDGARLHAQPRRAGGAAPAPVTLAWEQLIWRGGAL
QTRGRLEGLPLAWADALTLGEEDPEGALARAGLGGDLVFDGRWDLNLPAQASEPPRLSAL
LQRRGGDLAVQTLGAFDDPRASAHRIQAGVKTAELELRTEGRRVSARLRWDSERFGQAEA
ELGSELGPPDATHGAWHWPESAPLSGRVRASLPEVGVWSVLAPPGWRVRGSLGAEFNIAG
TRAAPQLSGLLEAKDLALRSLVDGIVFRGGELRATLAGERLVIERFRLEGRGGAERGGVL
QATGSAEWRRVQRDGATVREPLIALDVSAEQLRASSRPDRNVTVSGQVSARLEGAALRLR
GQLRADQALIVLPDEAAPSLGDDVVVRGTEYPIDRRGGVPVVPDVRITVDLGPSFELRGQ
GLQTRLAGQLEIRTNPPDPAPRIVGEVRTARGTYRAYGQQLAIESGVLGFAGAYDNPLLD
ITAVRPNTAQRVGVQITGTAQAPRVRLFSDPEMPDSEKLAYLVLGRPASGAGAEAAVLQQ
AALALLAGSDGGPLDGGLAQALGLDTLSFTGSSASATGDSGSTSAAVTLGKQIADNLYLS
YERSLAGTLSTVSMFYDVSRRVTVRARAGSENAIDLIFTLRYD
NT seq
4092 nt
NT seq
+upstream
nt +downstream
nt
atggccgagcccccgcgcccccttcctccgccggtcgcgccgccgccggccccgcgctgg
cccggcgccgccggctggttcggccgcgccctggtgtggctgttcggcgcgctcgccggc
gccgggctggccggtgcgctgctgctcggggcctgggccgccagcgaaggctcgctggcg
caggcgctgcgctggggcctggcctggcaggcggaaaaagcgcccgaggccggccggatc
gaggccgagggcgtgagcggcagcctcatcggcggcggccaggtgcaggcgctcggctgg
tcgcgggacgggctgtcggtgcaggcggaggggctgcgcctgcgcctgggcgggctgttc
tggctcggcctgctgcgccgcgacctgctggtgagcgagctgcacgccgcgcgcgtgcgc
gtgaccgaccagcgcccgcccgcaccgccctcgcccaccgagcccctgcagtccctggtg
ctgccgatcgacatcgaggccaacctgtcggtggacgagttgctgctgcccgggcaggcg
ccgctggcgctgcgcgcgctggacgcgcgctaccgctacggccgcgccgagcccggcctg
ggcaccgaacaggcgcacaccctgctgttgcgctcgctgcaatgggccgagggccgctac
agcgcccaggccacgctgggcgcgcaggcgcccatgccgctgcgcctgcaggccgaaggc
gaactccgcgccgaggtgcccgagggcgggcgcctcgacctgcgcgcgcgcgccacggcc
cagggcccgctggccggcgccgacgcggcgctcaacctggtcgcgcagatcgaaccccag
ggccgcaccgaggccacgcccacgctggccggcaccgcgcgcctgcgcccctgggcccct
cagcccctggccgaagccgacctgcggctgttccgcctgaacctggcgctgctgtggccc
caggcccccaccaccgcgctcaccggcaccgcccaggcccgacccgacggcgccgactgg
cgcgcgcgcctggcactgaacaacgaagcggccggcccgctggaccagcgccggctgccg
ctggagtccatcgacgccgaggtggtgcagagcggcgcgcgctggaccctggagcgcctg
gacgccgccgtggccggtggccgcgtgcgggccgagggccggcgcgacgcccccgccgag
ggcgccgcctccgcctggggcgactggcggggccagctgcgcgccagtggcctgaacccg
gccctggcctggagcgcgctggcgccggccgccctggacgcccgcgtcgacgcccgcgcc
gtcgacccgaacgccgcccgccccgccatcgacatcgacgcccgcgtggcgcccgctggg
cgccagccccgccgcagcgcggccgaggcctggcgcctgcgcgaactgctgctgcaaggc
cgctggcagcccggcgacacgcccggccagggccagttcaccgtgcgccaggcacgcctg
gacgcgctcgacggcgtgctgaacgcccagggccgcatcgacaccgcgcgccccttggcg
gagggctcgctcgacgccacgctgccaggcctgcgcgcgcgctggagcggcctgctcgcg
cacgcgcagggccagggcgagctgaacctggacctggccgacggcgcgcgcctgctggcc
tgggtgcgcgccctgggcgaggtgccgctgctcggcgaacacctgaagccggccctggcg
gcgctggccgacggccaggccgagggccaggcccaggcccgcctgcgctggcagggcggc
ctgggcgccttcggcttccccgggccgggccgcgccgccgcgccgcgcctggacctgagc
ctgggcaccgagcgcctgcgactggcccgtggtggcgacgcccccctggccctggaattg
ggcgccacacgcctcaccgtgcagggtccgcccgaggccctggccgtggccctgcgcacg
cgcgccgaggcctcgggctggcgcgccgagctggacaccgccggcgagctgggcttcatc
ggccggccgctggacgcgcggcgcggccagctggccctgagccggctcgcgctgtcggcc
acaccggccggcaacggccagggcgccggccgggcaaccagcggcgggaatggcggcgcc
gtgtcgtgggcgctgaccagcgactcgcccctgcgcgcgcgctggcaaccgcgcggcgag
gccatcgacgccgagctcgacggcgcccgcctgcacgcccagcccaggcgcgccggcggc
gccgcgcccgcgcccgtcaccctggcctgggagcaactcatctggcgcggcggcgccctg
cagacgcgaggacgcctcgagggcctgccactggcctgggccgacgcgctcaccctcggc
gaggaagaccccgaaggcgccctggcgcgcgccggcctgggcggcgacctggtgttcgac
ggccgctgggacctgaacctgcccgcccaggccagcgagccgccgcgcctgagcgccctg
ctgcagcgccgcggcggcgacctcgccgtgcagaccctgggcgccttcgacgatccacgc
gccagcgcgcaccgcatccaggccggcgtgaagaccgccgagctcgaactgcgcaccgag
ggccggcgcgtcagcgcgcgcctgcgctgggacagcgagcgcttcggccaggccgaggcc
gaactgggcagcgagctgggcccgcccgacgccacacacggcgcctggcactggcccgag
agcgcgccgctgtcgggccgcgtgcgcgccagcctgcccgaggtgggcgtgtggagcgtg
ctggcaccgccgggctggcgcgtgcgcggcagcctcggcgccgaattcaacatcgccggc
acccgcgccgcgccacagctcagcggcctgctggaggccaaggacctggccctgcgctcg
ctggtcgacggcatcgtgttccggggcggcgagctgcgcgccacgctcgcgggcgagcgc
ctcgtcatcgagcgcttccgcctcgaaggccgcggcggcgccgagcgcggcggcgtgctg
caggccaccggcagcgccgaatggcgccgcgtgcagcgcgacggcgccaccgtgcgcgag
cccctgatcgcgctggacgtgagcgccgagcagctgcgcgcctcctcgcgcccggaccgc
aacgtcaccgtcagcggccaggtcagcgcgcgcctggagggcgcggccctgcggctgcgc
ggccagctgcgcgccgaccaggccctcatcgtgctgcccgacgaggccgcgcccagcctg
ggcgacgacgtggtggtgcgcggcaccgagtaccccatcgaccggcgcggcggcgtgccc
gtggtccccgacgtgcgcatcaccgtcgacctgggcccgtccttcgagctgcgcggccag
ggcctgcagacgcgcctggccggccagctggaaatccgcaccaacccgcccgacccggcg
ccgcgcatcgtgggcgaagtgcgcaccgcgcgcggcacctaccgcgcctacggccagcag
ctcgccatcgagtccggcgtgctgggcttcgccggcgcctacgacaaccccttgctcgac
atcaccgccgtgcgccccaacaccgcacagcgtgtgggcgtgcagatcaccggcacggcc
caggcgccgcgcgtgcgcctcttctccgaccccgagatgcccgacagcgagaagctggcc
tacctggtgctgggccgcccggccagcggcgccggcgccgaagccgctgtgctgcagcag
gccgcgctggccctgctggccggcagcgacggcggcccgctcgatggcggcctggcccag
gccctgggcctggacacgctgagcttcaccggcagcagcgccagcgccaccggcgacagc
ggctccacctcggccgccgtcaccctgggcaagcagatcgccgacaacctgtacctcagc
tacgagcgcagcctggcgggcacgctgagcacggtgtccatgttctacgacgtctcgcgc
cgcgtgaccgtgcgcgcccgcgcgggcagcgaaaacgccatcgacctgatcttcacgctg
cgctacgactag
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