KEGG   Hydrogenophaga sp. SNF1: SOM08_17140
Entry
SOM08_17140       CDS       T10669                                 
Name
(GenBank) methyl-accepting chemotaxis protein
  KO
K02660  twitching motility protein PilJ
Organism
hydr  Hydrogenophaga sp. SNF1
Pathway
hydr02020  Two-component system
Brite
KEGG Orthology (KO) [BR:hydr00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    SOM08_17140
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:hydr02044]
    SOM08_17140
   02035 Bacterial motility proteins [BR:hydr02035]
    SOM08_17140
Secretion system [BR:hydr02044]
 Type II secretion system
  Pilin secretion/fimbrial assembly protein
   SOM08_17140
Bacterial motility proteins [BR:hydr02035]
 Pilus system
  Twitching motility proteins
   SOM08_17140
SSDB
Motif
Pfam: MCPsignal PilJ DUF3418 WXG100_2 DUF6535 BORCS6 Laminin_II
Other DBs
NCBI-ProteinID: WQB82704
LinkDB
Position
complement(3565475..3567733)
AA seq 752 aa
MATLDRFQGLFSKKNKEADEPDLAGVTDQEIAELAAARLAPDANTGDLDDNLLITEDDGE
VAKDALVSLPILGRRPAEQHQRSLAVLLAFALLVLGAITFFVLSQAEKISQQVAASGQAL
MQSQRLAKSVSQALVGSPTAFPEVRDSASVLATSVRGLKQGDSNMAIEPLGPEYGGALDD
LLPRIDAAERNASAVLGQQATLTQVGAALRTINRQSSDLLEIAETISSLKLQQNAPAAEI
SASGQLVMLTQRIGKSANEFLTLEGVSPEAVFLLGKDLITFKEVADGLLKGSDELRLGAA
RDPQVRERLQALLQRYEETRVEAGAILGNLQGLVAAREAQAAIVADSEPLRVGLEKLQQD
LSGRSGLGGGQLLALALSTVFALLCAGGLAYVQLQDSRQRQMMAEGQRLSAEAQEQEAKR
VNDANQAAILRLMNELQTVAEGDLTQEATVTEDITGAIADSVNYTVEELRSLVGNVQATA
TRVAQTTSAVENTSTELLAASTEQLREIRETGQSVLDMAQRINQVSSQAQESAQVARASL
QAAESGLQAVQDAIGGMNAIRDQIQETSKRIKRLGESSQEIGEITELISDITEQTNVLAL
NAAIQAASAGEAGRGFSVVAEEVQRLAERSADATRQIAALVKAIQTDTQDAVAAMERSTQ
GVVAGARLSDNAGTALSEIDRVSRRLADLIEQISTAASREAESANEVAGNIQHIFAVTEQ
TGEGTRSTAQQVRELSAMAEELRQSVARFKIA
NT seq 2259 nt   +upstreamnt  +downstreamnt
atggccacgcttgatcgattccaagggctgttctccaagaagaacaaggaggcggatgag
cctgacctggccggcgtgaccgatcaggagatcgcggagcttgcagcggcccgcctggcg
cccgacgccaacacgggggatctggacgacaacctgctgatcaccgaggacgatggcgag
gtcgccaaggacgcgctggtctcgctgcccatcctgggccgccgcccggcggaacagcac
cagcgctcgctcgcggtgctgctggccttcgcgctgctggtgctgggcgccatcacgttc
ttcgtgctgagtcaggcggaaaagatcagccagcaggtggccgccagcggtcaggcgctg
atgcagtcgcagcgtctggccaagagcgtgtcgcaggcgctggtgggcagccccaccgcc
ttccccgaggtgcgcgacagcgccagcgtgctggccaccagcgtgcgcggcctcaagcag
ggcgacagcaacatggcgatcgagccgctggggccggaatacggcggcgcgctcgacgac
ctgctgccgcgcatcgacgccgccgagcgcaacgcctcggccgtgctgggccagcaggcc
acgctgacgcaggtgggcgccgcgctgcgcaccatcaaccgccagtcgtccgacctgctg
gagattgccgagacgatctcctccctcaagctgcagcagaacgcgcccgccgccgagatc
tccgcgtccggtcagctcgtgatgctgacgcagcgcatcggcaagtcggccaacgagttc
ctgacgctggaaggcgtgagccccgaggcggtgttcctgctcggcaaggacctgatcacc
ttcaaggaagtggctgacggcctgctcaagggcagcgacgagctgcgcctgggcgccgcc
cgcgacccgcaggtgcgcgagcgcctgcaggccctgctgcagcgctacgaggagacccgc
gtcgaagccggcgccatcctgggcaacctgcagggcctggtggccgcgcgcgaggcgcag
gccgccatcgtggccgacagcgagccgctgcgcgtgggcctggagaagctgcagcaggac
ctctccggccgctcgggcctgggcggcggccagctgctggccctggccctgtccacggtg
ttcgcgctgctgtgcgcgggcggcctggcctacgtgcagctgcaggacagccgccagcgc
cagatgatggccgaaggccagcggctgtccgccgaggcgcaggagcaggaagccaagcgc
gtcaacgacgccaaccaggcggccattcttcgcctcatgaacgaactgcagacggtggcc
gagggcgacctgacgcaggaagcgaccgtgacggaggacatcacgggcgccatcgccgac
tcggtgaactacacggtggaagaactgcggtcgctggtgggcaacgtgcaggccacggcc
acccgcgtggcgcagaccacgtcggcggtggaaaacacctcgaccgagctgctggcggcc
tccaccgaacagctgcgcgagattcgcgagaccggtcagtcggtgctcgacatggcgcag
cgcatcaaccaggtgtccagccaggcgcaggagtcggcccaggtggcccgggcctcgctg
caggccgccgaatccggcctgcaggcggtgcaggacgccatcggcggcatgaacgccatc
cgcgaccagatccaggaaacctccaagcgcatcaagcggctgggcgagtcctcgcaagag
atcggcgagatcaccgaactgatctcggacatcaccgaacagaccaacgtgctggccctc
aacgccgccatccaggccgcgtccgccggtgaagcgggtcggggcttctcggtggtggcg
gaagaggtgcagcgcctggccgaacgctcggccgacgccacgcgccagatcgcggcgctg
gtgaaggccattcagaccgacacgcaggatgccgtggccgccatggagcgctccacgcag
ggcgtggtggcgggggcacggctgtccgacaacgcgggcaccgcgctgtccgagatcgac
cgcgtgtcgcgccggctggccgacctcattgagcagatctccaccgccgcctcccgcgaa
gccgaatcggccaacgaggtggcgggcaacatccagcacatcttcgcggtgaccgaacag
accggcgagggcacgcgctccacggcccagcaggtgcgtgagctgtcggccatggccgaa
gaactgcgccagtcggtggcccgattcaagatcgcctga

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