Hydrogenophaga sp. SNF1: SOM08_17325
Help
Entry
SOM08_17325 CDS
T10669
Name
(GenBank) calcium-binding protein
Organism
hydr Hydrogenophaga sp. SNF1
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HCBP_related
HemolysinCabind
Motif
Other DBs
NCBI-ProteinID:
WQB82738
LinkDB
All DBs
Position
complement(3604136..3607966)
Genome browser
AA seq
1276 aa
AA seq
DB search
MSQPQALTTAQLEAYSQQLANGTLANVEQVYADLYSKGYSYAGWAGGVASESTIAGVSAV
NFLTGTAMMGWGGEQCRNLPEATLDSIRMQMATRYVDVLIRYADRDGGVLSSDIDYRDTK
EIHEAVFANHNLSLDNWTLNTPMELVRQTQGDEAVEALWGKVRDTGGDGWDALAVNFELY
HIVSSLRFDPTYQEQAQTWIDEVPGFANFEEWGRLIDTVKEWLNNTQVGRMWNAIHQVIE
SDPLFLVNPLLNTAFTSARAVVLQRDPLVLDLDGDGLELSAASGNVLFDHNADGIKTGTG
WARPDDGLLVRDLNANGSIDSGRELFGVDTVKSNGQMATQGFDALADLDSNADGQITSAD
AAWAQLQVWRDTNQDGISQSGELSGLDALGITRIGLNGSASGPQAGQTINNNRVALSTTF
TRNGVNRTVGAIDLEANGFFSQIPPEVVDEAGNPVVITQAAHALPQMNGSGMVRNLRAAM
SLTGAQADELEAAVAAFAAAGTREAQRALLDNLITEWARTSSYWSSLEGYLGGAVTLTPP
AGMTGEQYRNMIGVLEAFNGSRFYAQLGSAMPAGQSGSTVNGVTGYSINPAAQQVAFLQQ
AYEALRESVYGALVMQTRLKPYLDAVELTVDGNGVHFDTSGLQALALQGAQTDALNAIKD
LTDLRRYGSEVLKGVGWAFEDTMAAVLTSVEITPDVMALLTAERLAWMGTQATSFTVSAA
QAGFTVIGNALDNSIAGNAAGSEYLHGGQGNDTLTAVGSWDVLDGGAGDDVLKLSNGAEQ
STTFIGGAGNDTMTGGGYNDTYVFNRGDGSDTITDYGTHGTSSIYLDQLSFGAGIAVSDV
GARRVGVDLVVTVAGVPGDQITIKNWFSEVNGFYRIEQINFADGTVWTHNNLAQLALATT
NTGTAGNDTISGTGTYSDRLIGLEGNDTLTAVGSWDVLDGGAGDDVLKLSNGAEQSTTFI
GGAGNDTMTGGGYNDTYVFNRGDGSDTITDYGTHGMSSIYLDRLNFGQGIATSDIGARRV
GVDLVVTVAGVPGDQITIKNWFNDGSGYQRIEQIGFSNGTVWTHNDLAQLALSTSNTGTA
GNDTISGTLHYSDRLMGGEGNDTLTAVGSWDALDGGAGDDVLKLSNGAEQSTTFIGGAGN
DTMTGGGYNDTYVFNRGDGSDTISDYGTHGTSSIYLDQLSFGAGITEEDLWFSRSGNDLR
VQVLGDGGQVQITNWYAGSNYLIEEMHLSDGQRLLFSQVDSLVNAMAAFAPPAPGQTSLT
PEQQVALTPVIAAAWN
NT seq
3831 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaaccgcaagcactgaccaccgcgcaacttgaagcctactctcagcaacttgcc
aacggcacgctggccaatgtggagcaggtttatgccgatctctacagcaagggctacagc
tacgccggctgggccggtggggtcgcgagtgagagcaccattgccggcgtgtcagcggtg
aacttcctgacgggcacggccatgatggggtggggcggtgagcagtgtcgtaacttgcca
gaggcgacactggattcgattcgaatgcagatggcgacgcgctacgtcgatgtcctcatc
cgatatgcagatcgtgatggcggggtgctttccagcgacatcgactatcgcgatacaaaa
gaaattcacgaagctgtcttcgcaaaccacaacctctccctcgacaactggaccctcaac
acccccatggaactggttcgccagacccaaggcgatgaggcggttgaggccctttgggga
aaggttcgagacaccggtggcgatggttgggacgcgctcgccgtaaattttgagctctat
cacatcgttagctcgctgaggtttgaccctacctatcaagaacaggcacaaacatggatt
gacgaggttccgggtttcgcgaacttcgaagaatggggccggctgatcgatacggtgaag
gagtggctgaacaacacgcaagtcggtcgcatgtggaatgccatccaccaagtcatcgaa
agcgacccgctcttcctggtcaatcccctgctcaacaccgcgttcacttccgcccgagcc
gtcgttcttcaacgcgacccgctggtgctggacctcgacggcgacggcctggaactctct
gccgccagcggcaacgtgctgttcgaccacaacgccgacggcatcaagacgggcactggc
tgggcgcgccccgacgatggcttgctggtgcgcgacctgaacgccaacggcagcatcgac
tccggccgggaactcttcggcgtggacacggtgaagagcaacggccagatggccacgcag
ggcttcgacgcgctggctgatctggattcgaacgccgacggccagatcaccagcgcggac
gctgcctgggcccaactgcaggtctggcgcgatacgaaccaggacggcatcagccaaagc
ggcgagctcagcgggctcgatgcgttgggcatcacgcgcattgggctcaacggcagcgcc
agtggcccgcaggcggggcagacgatcaacaacaaccgggtggcgctgagcaccacgttc
acgcgcaatggggtcaaccgcacggtgggggcgatcgacctggaggccaatggcttcttc
tcgcagatcccgccagaagtggtggacgaggcgggcaacccggtggtgatcacgcaggcg
gcgcatgcgctgccgcagatgaacggctcggggatggtgaggaacctgagggcggcgatg
agcctgacgggcgcgcaggccgatgagctggaggcggcggtggcggcgttcgcggcagcg
ggcacgcgggaggcgcagagggctttgctcgacaacctcatcaccgaatgggcacggacc
tcgagctactggagcagcctggaaggctacctggggggcgcggtgacgctgacgccgccg
gcgggcatgaccggtgagcagtaccgcaacatgatcggcgtgctggaggcgttcaatggc
agccggttctatgcgcagctgggcagcgcgatgccggcggggcagtcgggcagcacggtc
aatggagtgacgggctactccatcaacccggcggcgcagcaggtggcgttcttgcagcag
gcgtatgaggcgctgagagagagcgtgtatggcgcgctggtgatgcagacgcggctcaag
ccgtatctggatgcggtggagctgacggtggatggaaatggcgttcatttcgacacctcg
ggccttcaggcgctggcgctgcaaggagcgcagaccgatgcgctcaatgcgatcaaagac
ctgacggaccttaggcgctatggcagtgaggttctgaagggtgtggggtgggcgtttgaa
gacaccatggccgcggtgctgacgtcggtggagattacgccggacgtgatggccttgctg
acagcggagaggctggcatggatggggacgcaggccacgtcgtttaccgtttcggccgcg
caagccgggttcacggtgattggcaatgcgctggacaacagcatcgctggcaacgccgct
gggtccgagtacctccatggcggtcaaggcaacgacacgctgacggcggtgggcagctgg
gacgtgctcgacggcggagcgggggatgacgtgctcaagctgagcaacggtgcggagcag
tccaccacgttcattggtggggcgggcaacgacaccatgacgggcggcggctacaacgac
acctatgtgttcaaccggggcgatggctcggacaccatcaccgactacggcacgcacggc
acgagcagcatttacctggaccagctcagctttggtgcaggcatcgccgtgagcgacgtg
ggagcgcgccgggtaggcgtggatctggtggtcacggtggcgggtgtgccgggcgaccag
atcacgatcaagaactggttcagcgaggtcaatggcttctaccgcatcgagcaaatcaac
ttcgctgacgggacggtctggacccacaacaacctggcgcagctggcgctggccacgacg
aacaccggcacggccggcaacgacaccatcagtggaacgggaacctacagcgaccggctg
attggcctggagggcaacgacacgctgacggcggtgggcagctgggacgtgctcgacggc
ggagcgggggatgacgtgctcaagctgagcaacggtgcggagcagtccaccacgttcatt
ggtggggcgggcaacgacaccatgacgggcggtggctacaacgacacctatgtgttcaac
cggggcgatggctcggacaccatcaccgactacggcacgcacggcatgagcagcatttac
ctggaccggctgaacttcggccagggcatcgcgaccagcgacatcggcgcgcgtcgcgtg
ggcgtggatctggtggtcacggtggcgggtgtgccgggcgaccagatcacgatcaagaac
tggttcaacgatggcagcggctaccagcgcatcgagcagatcggtttctcgaatggaacg
gtctggacgcacaacgacttggcacagctggcgctgagcacgagcaacaccggcacggct
ggcaacgacaccatcagcggcacgctgcactacagcgatcggttgatgggcggtgagggc
aacgacacgctgacggcggtgggcagctgggacgcgctcgacggcggagcgggggatgac
gtgctcaagctgagcaacggtgcggagcagtccaccacgttcattggtggggcgggcaac
gacaccatgacgggcggtggctacaacgacacctatgtgttcaaccggggcgatggctcg
gacaccatcagcgactacggcacgcacggcacgagcagcatttacctggaccagctcagc
tttggtgcaggcatcaccgaagaggatctgtggttctcccgctcaggcaatgacttgcgg
gtgcaggtgctcggtgatggcggtcaggtgcagatcacgaactggtacgccggctccaac
tacctcatcgaggagatgcacctgagcgacggccagaggctgctgttcagtcaagtcgac
tccctcgtcaacgcgatggccgccttcgctccacccgcaccgggccagacctcactcacg
cccgagcagcaggtcgccttgactccggtgatcgcggcagcctggaactga
DBGET
integrated database retrieval system
