Hydrogenophaga sp. SNF1: SOM08_17735
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Entry
SOM08_17735 CDS
T10669
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
hydr Hydrogenophaga sp. SNF1
Pathway
hydr00300
Lysine biosynthesis
hydr00470
D-Amino acid metabolism
hydr01100
Metabolic pathways
hydr01110
Biosynthesis of secondary metabolites
hydr01120
Microbial metabolism in diverse environments
hydr01230
Biosynthesis of amino acids
Module
hydr_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
Enzymes [BR:
hydr01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
SOM08_17735 (dapF)
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Other DBs
NCBI-ProteinID:
WQB82816
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Position
complement(3695993..3696877)
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AA seq
294 aa
AA seq
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MRIRFTKMQGAGNDFVVLDETRGRLGLSTAQYRFLADRHFGVGADQILSVREAPEPGLDF
EYVIHNADGGEVEHCGNGARCFVRYVHDKGLSERNPLRVKVKNGVLELKRLPDGRVTVDM
GPPVFALPQVPFEAKGLKAEKLGNFERWPLAVPYAGDQYVAVLSMGNPHAVLLVDDVDTA
PVAAWGPLIENHERFPRRVNAGFLQVIDTRTVKLRVYERGAGETLACGTGACAAVVAGIR
LGWLGSRVDVHTRGGVLTIEWVDTPEHDAPVFMTGPATPVFEGEITVPDELNQP
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgcggatccgcttcaccaagatgcaaggcgcgggcaacgacttcgtcgtgctcgacgag
acgcgcggacggctcgggctcagcacggcgcagtaccgctttctcgccgaccgccatttc
ggcgtcggcgccgaccagatcctctccgtgcgcgaagcccccgagccgggtctggacttc
gaatacgtcatccacaacgccgacggcggcgaggtggagcactgtggcaacggcgcgcgc
tgcttcgtgcgctacgtgcacgacaagggcctgagcgagcgcaacccgctgcgcgtgaag
gtgaagaacggcgtgctggagctcaagcgtctgccggacggccgcgtcaccgtggacatg
ggcccgccggtcttcgcgctgccccaggtgcctttcgaggccaagggcctgaaggcagag
aagctcggcaacttcgaacgctggccgctggccgtgccctacgcgggcgaccagtacgtg
gccgtgctgtccatgggcaacccgcacgcggtgctgctggtcgacgacgtcgacaccgcg
ccggtggcggcctggggcccgctgatcgagaaccacgagcgctttccccggcgcgtcaac
gccggcttccttcaggtgatcgacacccgcaccgtgaagctgcgcgtgtacgagcgcggt
gcgggcgaaaccctggcctgcggcaccggcgcttgcgctgccgtggtggcgggcatccgc
ctgggctggctgggctcgcgcgtggacgtgcacacccgcggcggcgtgctcaccatcgaa
tgggtcgacacgcccgaacacgacgcccccgtgttcatgaccggccctgccacccccgtg
ttcgagggcgagatcaccgtgcccgacgagctgaaccaaccgtaa
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