Hydrogenophaga sp. SNF1: SOM08_17800
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Entry
SOM08_17800 CDS
T10669
Name
(GenBank) ABC transporter ATP-binding protein/permease
KO
K24821
ATP-binding cassette, subfamily B, heavy metal transporter
Organism
hydr Hydrogenophaga sp. SNF1
Pathway
hydr02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
hydr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SOM08_17800
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hydr02000
]
SOM08_17800
Transporters [BR:
hydr02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
SOM08_17800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
AAA_25
AAA_29
ABC_ATPase
AAA_22
AAA_18
AAA
AAA_15
AAA_33
AAA_21
RsgA_GTPase
Cytidylate_kin
nSTAND3
NACHT
AAA_5
Sigma54_activat
Lig_chan
DUF87
AAA_28
AAA_24
NB-ARC
nSTAND1
Motif
Other DBs
NCBI-ProteinID:
WQB82828
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All DBs
Position
complement(3709427..3711277)
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AA seq
616 aa
AA seq
DB search
MRPDTPTRGRVALPSAPGESAAAPARRSDWATLRRLLPYLWQYKWRVIAALAFMVAAKLA
NVGVPVLLKQLVDAMNIPPGSAQALLVVPLGLLLAYGGLRLCTSLFTELRELVFAKATEG
ATRHIALQVFGHLHSLSLRFHLERQTGGMTRDIERGTRGVQSLISYSLYSIVPTLIEVTL
VLTLLGTQFDMGYVWITLAALVLYVGFTVVVTEWRTQFRRRMNELESAGQTRAIDSLLNY
ETVKYFNNEHYEATRYDEALQKLRRARLVSQRTLSLLNAGQQLVIAVALVFMLWRATNGV
VAGKLTLGDLVMINAFMIQLYIPLGFLGVLYREIKQSLTDLEKMFSLLEKEREVADAPGA
KPLVLDGPPTVRFENVHFSYEPAREILHGLSFDIPAGKTVAVVGPSGSGKSTLARLLYRF
YDTSNRANGEGRITINGQDIAEVTQSSVREAIGIVPQDTVLFNDTIEYNILYGRPEAGHE
AAVAAAEAAHIRGFIERLPQGWRTMVGERGLKLSGGEKQRVAIARTLLKNPPIMIFDEAT
SALDSANERAIQAELRQAARHKTALVIAHRLSTVVDAHEILVLENGRIVERGRHADLVAR
GGAYARMWALQQAGND
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcccgatacccccacccgaggccgtgtggccttgccgtccgcgcccggcgagtcc
gccgcggcgcccgcccgccgctccgactgggccaccctgcggcgcctgctgccctacctg
tggcaatacaaatggcgcgtgatcgccgcgctggccttcatggtggcggccaagctcgcc
aacgtgggcgtgccggtgctgctcaagcagctggtggacgccatgaacatcccgccgggc
agcgcccaggcgctgctggtggtgccgctcggcctgctgctggcctacggcggcctgcgc
ctgtgcaccagcctgttcaccgagttgcgcgaactcgtcttcgccaaggccaccgagggc
gccacgcgccacatcgcgctgcaggtgttcggccacctgcacagcctgagcctgcgcttc
cacctggagcgccagaccggcggcatgacgcgcgacatcgagcgcggcacgcgcggcgtg
caatcgctgatctcgtactcgctctacagcatcgtgcccacgctgatcgaggtgacgctg
gtgctcacgctgctgggtacgcagttcgacatgggctacgtgtggatcacgctggcggcc
ctggtgctgtacgtcggcttcaccgtggtggtgaccgagtggcgcacccagttccgccgc
cgcatgaacgaactggaatcggccggccagacgcgcgccatcgattcgctgctgaactac
gaaacggtcaagtacttcaacaacgaacattacgaggccacgcgctacgacgaggccctg
cagaagctgcgccgcgcgcgcctggtgagccagcgcacgctgtcgctgctgaacgcggga
cagcagctggtcattgcggtggcgctggtgttcatgctgtggcgcgccacgaacggcgtg
gtggccggcaagctcacgctgggcgacctcgtcatgatcaacgccttcatgatccagctc
tacatcccgctgggtttcctgggtgtgctctaccgcgagatcaagcagagcctgaccgac
ctggaaaagatgttctcgctgctcgagaaggagcgcgaggtggcggacgcgcccggcgcg
aagccgctcgtgctcgacgggccgcccaccgtgcgtttcgagaacgtgcatttctcctac
gagcccgcgcgcgagatcctgcacggcctgagcttcgacatcccggccggcaagacagtg
gcggtggtggggccctcgggttcgggcaagagcacgctggcgcgcctgctctaccgcttc
tacgacaccagcaaccgggccaatggggaaggtcgcatcacgatcaacggccaggacatc
gccgaggtcacgcagtccagcgtgcgcgaggccatcggcatcgtcccgcaggacacggtg
ctcttcaacgacaccatcgaatacaacatcctctacggccggcccgaggcggggcacgag
gcggcggtggcggcggccgaggcggcgcacatccgcggcttcatcgagcgcttgccccag
ggctggcgcaccatggtgggtgagcgcgggctcaagctgtcgggcggcgagaagcagcgc
gtggcgatcgcccgcaccctgctgaagaacccgccgatcatgatcttcgacgaggcgacc
agcgcgctggactcggccaacgagcgggcgatccaggcggaactgcgccaggccgcgcgc
cacaaaaccgcgctcgtcatcgcgcaccggctgtccacggtggtcgacgcccacgaaatc
ctggtgctggagaacggccggatcgtcgaacgcgggcgccacgccgacctggtggcgcgg
ggcggcgcctacgcccgcatgtgggcgctgcagcaagccggcaacgactga
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