Hydrogenophaga sp. SNF1: SOM08_18005
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Entry
SOM08_18005 CDS
T10669
Name
(GenBank) LysR substrate-binding domain-containing protein
KO
K14057
LysR family transcriptional regulator, regulator of abg operon
Organism
hydr Hydrogenophaga sp. SNF1
Brite
KEGG Orthology (KO) [BR:
hydr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hydr03000
]
SOM08_18005
Transcription factors [BR:
hydr03000
]
Prokaryotic type
Helix-turn-helix
LysR family
SOM08_18005
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Ortholog
Paralog
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
MarR_2
DUF5330
Motif
Other DBs
NCBI-ProteinID:
WQB82869
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Position
3754998..3755891
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AA seq
297 aa
AA seq
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MKLDQLQHLMAIVEHGSLRAAARRLDMPQPALTRSVRALERELGVSLFARETTGMVLTAE
GVRFHRRACVITSEAQRAREEVQHPGPAYEGTVSVALSIMPHLGMLPDALPVFRHAYPKV
RLNITESLMPGVESALRDGGLEFYLGAAPSQKLAPGLAMRHLCDNTRVVVCRKGHPLARV
RSLKALAGAEWASTTIDHNAEQDLARLFASHGRAAPRVMLSAHSALSVQVALVRTDLLAM
LPRQWLDFAMTRDLLDVIPVRERLPAPAIVLVRRPDLPLSPPAEFLCDVLMRRLPSA
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcgatcagctgcagcatctgatggccatcgtcgaacacggcagcctgcgcgcg
gccgccaggcgcttggatatgccccagcccgcgctgacgcgcagcgtgcgggccctagag
cgggaactgggtgtgagcttgtttgcgcgggagaccacaggcatggtcctgaccgccgaa
ggcgtgcgctttcatcgccgggcctgcgtcatcaccagcgaggctcagcgcgcgcgggaa
gaggtgcagcacccggggccggcctacgagggaacggtatcggtggccttgtcgatcatg
ccccacctgggcatgctgcccgatgcgctgccggtgttccgccatgcctatccgaaggtc
aggctcaacatcaccgagagcctgatgcccggcgtggaaagtgcattgcgcgacggcggg
ctggagttctaccttggcgctgcgccatcgcagaagctggcgccgggcctggcaatgcgg
cacctgtgcgacaacacgcgcgtggtggtttgccgcaaaggccacccactggcgcgcgtg
cgcagcctcaaggccctggccggcgccgagtgggccagcaccaccatcgaccacaacgcc
gagcaggacctggcgcggctttttgcctcccacggtcgggccgcgccgcgcgtgatgctg
agcgcgcactccgcgctgtcggtgcaggtggccctggtgcgaaccgacctgctggccatg
ttgcctcggcagtggttggacttcgccatgacgcgtgacctgctggacgtcatccccgtg
cgcgagcgcctgccagcgcccgccatcgtgctggtgcgccgacccgacctgccgctgtcg
ccgccagcggagtttttgtgcgacgtgctgatgcgccgtcttccatcagcctga
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