Hydrogenophaga sp. SNF1: SOM08_18220
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Entry
SOM08_18220 CDS
T10669
Name
(GenBank) HAMP domain-containing sensor histidine kinase
Organism
hydr Hydrogenophaga sp. SNF1
Pathway
hydr02020
Two-component system
hydr02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
hydr00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SOM08_18220
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SOM08_18220
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Gene cluster
GFIT
Motif
Pfam:
HATPase_c
HisKA
HATPase_c_3
IFT81_CH
Motif
Other DBs
NCBI-ProteinID:
WQB82911
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Position
3799453..3800739
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AA seq
428 aa
AA seq
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MLDEVVHTPLEPILHPSPRRLVWIGFFTFSGHLLIYWIWAHAVPQPYENPLARLLMAFTA
LIYLMPSLRRDPTSAASGRLFSLATWIQLPWFFTWMYAMNGGNPAWLGSVAAMVLIYYHA
TDWRLATLGLFTGGAAGLYSAHLMGASPVGPEQPLANVVVIAFAWTMGLMLGISSANLRR
ARLLNTLSTMGVMAHELRTPLATVNLMGDVLRNLSQHDVSDAKRKKFEELATRLQNLVRS
MNRQIDTQISNAQLLRLPREQSTIRAAELVQEVVANYPYRSSRERDCVRVQVQQDFCFLG
SRSLFAQVVINLLKNALHALAAASHAPQPGDLRVDVGIHHGKGRIAVSDDGVGISHELQN
RIFEPFYSSQAGAGNGLGLTFCKNVVEAARGRLSVHSEPGLGAVFMIDLPLTATAPVRPA
ATAQSQWL
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
ttgctcgacgaagtcgtgcacacgccgctggagcccattttgcacccatcgccgcgccga
ctggtgtggatcggcttcttcacgttcagcgggcacctgctgatctactggatctgggcg
cacgccgtgccccagccctacgagaacccactggcccggctcctgatggcgttcacggcg
ctcatctacctcatgcccagcctgcgccgcgacccgacctcggccgccagcgggcgtctg
ttcagcctggccacctggatccagctgccgtggttcttcacctggatgtacgccatgaac
ggcggcaaccccgcctggctgggcagcgtcgcggccatggtcctcatctactaccacgcc
accgactggcgcctggccacgctgggcctgttcaccggcggtgcggcggggctgtactcg
gcgcacctcatgggcgccagccccgtgggcccggagcagcccctggccaacgtggtcgtg
atcgccttcgcctggaccatgggcctgatgctgggcatctccagcgccaacctgcgccgc
gcccggttgctcaacaccctctccaccatgggcgtgatggcgcacgagttgcgcacccct
ctggccaccgtgaacctgatgggtgacgtgctgcgcaacctctcgcagcacgacgtgagc
gacgccaagcgcaagaagttcgaggaactggccacgcggctgcaaaacctggtgcgcagc
atgaaccgccagatcgacacccagatctccaacgcccagctgctgcgcctgccgcgcgaa
caaagcaccatccgggcggccgaactggttcaggaggtggtcgccaactacccctaccgc
agctcgcgcgagcgcgactgcgtgcgtgtgcaggtgcagcaggacttctgcttcctcggt
tcgcgctccctgttcgcccaggtggtgatcaacctgctgaagaacgccctgcacgccttg
gcggccgccagccacgcgccccaaccgggcgatttgcgggtcgacgtgggcatccatcac
ggcaagggccgcatcgccgtctcggacgacggcgtcggcatctcgcacgagttgcagaat
cgcatctttgaacctttttattcctcgcaggccggcgcaggcaacggactgggcctcacg
ttctgcaagaacgtggtcgaagccgcgcgtggccgcctgagcgtgcactccgaacccgga
ctgggcgccgtcttcatgatcgacctgcccctgaccgcgacggcgcccgttcggcccgcc
gccaccgcccaatcccaatggctctga
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