Hydrogenophaga sp. SNF1: SOM08_18245
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Entry
SOM08_18245 CDS
T10669
Name
(GenBank) TRAP transporter large permease subunit
KO
K11690
TRAP-type transport system large permease protein
Organism
hydr Hydrogenophaga sp. SNF1
Pathway
hydr02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
hydr00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SOM08_18245
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hydr02000
]
SOM08_18245
Transporters [BR:
hydr02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
SOM08_18245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctM
Motif
Other DBs
NCBI-ProteinID:
WQB82916
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All DBs
Position
3805291..3807294
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AA seq
667 aa
AA seq
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MAIRKELWFGFTLMGVIVAGVLAMVFSVDTMTNGHYGLLMLSLVVVAIMLGFPTAFTLMG
MGMIFTFFAYHSGNQTAAGAITQTLDLMVQRAFSVMASDVLIAIPLFVFMGYLVERANLI
EKLFRSLHLSLARVPGSLAVATLVTCAVFATATGIVGAVVTLMGLLALPQMLKGGYDTRL
AAGAITAGGCLGILIPPSVLLIVYGATAGVSVVKLYAGAFFPGLMLAGLYIVYVIVMAKL
KPTWAPPLTAEQRRVPLPEPLLKLGATAGKSALLGLLSALKGRNNQGVSTGYLLRQLGVV
LLPAALFVAVAVLSYPSAKPVAADVPAGLVPLGLGGGAQDSGGGLAEPPGADDQGLAEPD
GGLSEPPSSEGGDGLAEPPSADEPEALGEPATGGLAEPSAAPAGTGDGASGADTAQGGAG
SGYWIGVAVGALALAVFYALFSYARVEIFKMLLASFFPLMVLILAVLGSIVFGLATPTEA
AAVGAFGGLLLAAAYRQLTFSVVKESVFLTAKTSAMVCWLFVGSAIFSAAFALLGGQELV
EQWVLGMNLSKTEFLILSQVIIFILGWPLEWTEIIVIFMPIFIPLLDNFGVDPLFFGLLV
ALNLQTAFLSPPVAMSAFYLKGVAPKHVTLNQIFAGMIPFMGIQIIAIVLLYLFPGIGLW
LPSVLYN
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atggcgatccgcaaggaactctggttcggcttcacgctgatgggcgtcatcgtggccggc
gtgctggccatggtgttcagtgtcgacaccatgaccaacggccactacggcctgctcatg
ctctcgctggtggtggtggccatcatgctgggctttcccaccgccttcacgctcatgggc
atgggcatgatcttcaccttcttcgcctaccactcgggcaaccagaccgcggccggcgcg
atcacgcagacactggatctgatggtgcagcgcgctttctcggtgatggccagcgacgtg
ctgatcgccatccccctgttcgtgttcatgggctacctggtcgagcgggcgaacctgatc
gagaagctctttcgcagcctgcatctgtcgctggcgcgcgtgccgggctcgctggccgtg
gccacgctggtcacctgcgcggtgttcgccacggccaccggcatcgtcggggcggtggtc
acgctcatgggcctgctggcgctgccgcagatgctcaagggcggctacgacacgcgattg
gcggcgggcgccatcaccgcaggcggctgcctgggcatcctgatcccgccgtcggtgctg
ctcatcgtctacggggccacggccggcgtgtcggtggtcaagctgtacgcgggggcgttc
ttccccgggctcatgctggcgggtctgtacatcgtgtacgtgatcgtcatggccaagctc
aagccgacctgggcaccgcctctgaccgccgagcagcgtcgcgtgccgctgcccgagcct
ctgctgaagctgggcgccaccgccggcaagtcggccctgctcggcctgctgtcggcgctc
aagggccgcaacaaccagggcgtctccaccggctacctgctgcgccagctcggcgtggtg
ctgttgccggcggccctgttcgtggccgtggcggtgctcagctaccccagcgccaagccg
gtggcggccgatgtgccggccggtctggtgcccctgggtctgggcggcggtgcacaggac
agcggcggcggcctggccgagccaccgggcgccgacgaccagggactggccgagcccgat
ggcggactgagcgagccgcccagcagcgaaggcggcgatggcttggccgagccaccctcc
gcggacgagcccgaggcgctgggcgagcccgcgaccggcggcctcgccgagccttcggcg
gcgccggctggcacgggtgacggcgcctcgggcgctgacactgcgcagggcggcgcgggc
agtggctactggatcggcgtggccgtgggagccctcgcgctcgcggtgttctatgcgctg
ttcagctacgccagggtcgagattttcaagatgctgctcgccagcttcttcccgctgatg
gtgctcatcctggccgttctcggctccatcgtgttcggcctggcgacgcccaccgaagcg
gccgccgtcggtgcctttggcggccttctcctggcggccgcctaccggcagctcacgttc
agcgtggtcaaagaaagcgtcttcctcacggccaagacgagtgcgatggtgtgctggctg
ttcgtgggctcggccatcttctcggccgccttcgcactgctgggcggacaggagctggtc
gagcagtgggtgctgggcatgaacctgtccaaaaccgagttcctgatcctgtcgcaggtg
atcatcttcatcctgggctggccgctggaatggaccgagatcatcgtgatcttcatgccc
atcttcatcccgctgctggacaacttcggcgtcgacccgctgttcttcggcctgctggtg
gcgctgaacctgcagaccgccttcttgagcccaccggtggccatgagcgcgttttatctg
aagggcgtcgcaccgaagcacgtgacgctgaaccagatcttcgccggcatgattcccttc
atgggcatacagatcatcgccatcgttctgctgtacctgttccccgggatcggcctgtgg
ctgccctcggtgctctacaactga
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