Hydrogenophaga sp. SNF1: SOM08_18500
Help
Entry
SOM08_18500 CDS
T10669
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
hydr Hydrogenophaga sp. SNF1
Brite
KEGG Orthology (KO) [BR:
hydr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hydr02000
]
SOM08_18500
Transporters [BR:
hydr02000
]
Other transporters
Pores ion channels [TC:
1
]
SOM08_18500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
WQB82963
LinkDB
All DBs
Position
complement(3863780..3865921)
Genome browser
AA seq
713 aa
AA seq
DB search
MRALRHTVPGAWLCLCSGALAQGVPVPDGGALAPVVITGNASAAQRWLGSASVDVIEGSE
LRDGQLQINLSEGLGRVPGLVIRQRENYAQDLQVSIRGHGARATFGVRGVRLFVDGIPAS
APDGSGQAANFPLGSADRIEVVRGPFAALYGASSGGAILLYTQDGARPGEWRTGLAAGPH
GLWRLSTQVAGQTGTAASPGWSYLLDVGRFETDGQRPQSAAQRSTANAKLSRAHEGGRTT
LVFNRQSAFSYDPLGLSRAQFDADPEQTDASAIHFNTRKSVSQTQAGLAWDQSLGGGHRI
ELMGYAGQRRVLQFQSIPTGAQAAPGSSGGVIDLDRDYWGFNARWRLKTDWQGGALDLSA
GLAMDRQSDARRGYNNFVGGTLGVQGTLRRDENNRADTLDPYLRAAWTREDWTLEGGVRR
VRTRFESSDRFLANGDDSGSARYSGTLPVVGARWRIAPNLQAFGSVGRGLETPTLNEAAY
RSGGGAGLNTDLNAARSTSAEIGLRGRHANGVWNATLFDIRTRDEIVVQNNTGGRSTFQN
AGRTERQGLELAGEWALGEFALTGAYTALSARYRDGFLTCTATLCPNVNPPTPIPAGRRM
PGLPAQQVFAQLAWTPRWAAPVGGVFTLEARRSGRVFVNDLNTDAAEAYTLFALGARFEQ
STGPWTWRQFMRLDNLTDRRHAGSVIVNEGNGRFFEPGAGRSLSAGVELTRRF
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgagggcgcttcgccacaccgtgccgggcgcctggctctgcttgtgcagcggcgcgctg
gcccagggcgtgcccgtacccgatggcggcgcgctcgcacccgtggtgatcacgggcaac
gccagcgccgcgcagcgctggctgggcagcgccagcgtggatgtgatcgagggcagcgag
ctgcgcgacgggcaactgcagatcaacctgtccgagggcctggggcgtgtgccggggctg
gtcatccgccagcgcgagaactacgcgcaggacctgcaggtgtcgatccgcggccacgga
gcgcgggccaccttcggcgtgcgcggcgtgcgcctgttcgtcgatggcattcccgccagc
gcgcccgacggttcgggccaggcggccaacttcccgctcggcagcgccgaccgcatcgag
gtggtgcgcggtcccttcgccgcgctgtacggcgcctccagcggcggcgccatcctgctc
tacacgcaggatggcgcgcgcccgggcgagtggcggaccggcctggccgccgggccgcat
gggctgtggcgcctgtccacgcaggtggcggggcagaccggcacggcggcctcgccgggc
tggtcctacctgctcgatgtgggccgcttcgagaccgacggccagcggccgcaatcggcc
gcgcagcgcagcacggccaatgccaagctgtcgcgcgcgcacgagggcggccgcaccacg
ctggtgttcaaccgccagagcgccttttcgtacgatcccctgggcctgtcgcgcgcgcag
ttcgacgccgaccccgagcagaccgatgccagcgcgatccacttcaacacgcgcaagtcg
gtgtcgcagacgcaggccggcttggcctgggaccaatcgctgggcggcggccaccggatc
gagctcatgggctacgcgggccagcgccgcgtgctgcagttccagtccattcccaccggc
gcgcaggccgcgccgggcagctcgggcggcgtgatcgacctggaccgcgactactggggc
ttcaacgcgcgctggcgcctcaagaccgattggcagggcggcgcgctggacctgagcgcg
ggcctggccatggaccgccagagcgacgcgcgccgcggctacaacaacttcgtgggcggc
acgctgggcgtgcaaggcaccctgcgccgcgacgagaacaaccgcgccgacacgctggac
ccgtatctgcgcgccgcctggacgcgtgaggactggacgctcgagggcggcgtgcgccgt
gtgcgcacgcgcttcgagtcgagcgaccgcttcctcgccaatggcgacgacagcggcagc
gcgcgctacagcggcaccctgcccgtggtcggcgcgcgctggcgcatcgcaccgaacctg
caggccttcggcagcgtggggcgcgggctcgaaacacccacgctcaacgaggccgcctac
cgcagcggcggtggcgccggcctcaacaccgacctgaacgccgcgcgcagcaccagcgcc
gagatcggcttgcgtgggcgccacgccaacggcgtgtggaatgccacgctgttcgacatc
cgcacgcgcgacgagatcgtggtgcagaacaacaccggcggacgctccactttccagaac
gccggccgtaccgagcgccagggcctggagctggccggtgaatgggccctgggcgagttc
gcgctgacgggtgcctacacggccctgagcgcgcgctaccgcgacggcttcctcacctgc
accgcgaccctgtgcccgaacgtgaacccgcccacgcccatccccgcgggccggcgcatg
ccgggcctgccggcgcaacaggtgttcgcgcaactggcgtggacgccgcgctgggccgcg
ccggtgggcggcgtgttcacgctggaggcgcggcgcagcgggcgcgtgttcgtgaacgac
ctcaacaccgacgcggccgaggcctacaccctgttcgcgctgggcgcgcgctttgaacag
tccaccgggccctggacctggcgccagttcatgcgcctggacaacctgacggaccgccgc
cacgcgggctcggtcatcgtcaacgaaggcaacggccgcttcttcgagccgggcgcgggg
cgctcgctgtcggcgggcgtcgagctcacgcggcgcttctag
DBGET
integrated database retrieval system
