Hydrogenophaga sp. SNF1: SOM08_18695
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Entry
SOM08_18695 CDS
T10669
Symbol
fliA
Name
(GenBank) RNA polymerase sigma factor FliA
KO
K02405
RNA polymerase sigma factor FliA
Organism
hydr Hydrogenophaga sp. SNF1
Pathway
hydr02020
Two-component system
hydr02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
hydr00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SOM08_18695 (fliA)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
SOM08_18695 (fliA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hydr03021
]
SOM08_18695 (fliA)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
hydr02035
]
SOM08_18695 (fliA)
Transcription machinery [BR:
hydr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SOM08_18695 (fliA)
Bacterial motility proteins [BR:
hydr02035
]
Flagellar system
Flagellar assembly proteins
Stator
SOM08_18695 (fliA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
HTH_23
Motif
Other DBs
NCBI-ProteinID:
WQB83002
LinkDB
All DBs
Position
complement(3899334..3900026)
Genome browser
AA seq
230 aa
AA seq
DB search
MNSLAAAESSAAAEQRWLVEHTPLVRRAVAQLASQAGGAMDRDDMLQIGLMGLLEALRRY
GEPDERFPGYAAQRVRGAILDELRRQDWRPRSVRQEGHRLRDGIRELRRRLGHEPSEAEV
MQHLGVSAEDYLAYEQHTNAETLASFDEVIEELMLTPSAARTPEAELIQRRSLEQALACL
NPKEQHVVQLYYEAELSLKEIGAVMGLTEARVCQINKSALQKLRGALSPD
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgaacagcctggccgcggcggagagctccgccgcggcggagcagcgctggctcgtcgag
cacacgccgctggtgcgccgcgcggtggcccagctcgcctcgcaggcgggtggcgcgatg
gaccgcgatgacatgctgcagatcggcctgatgggcctgctggaggcgctgcgccgctac
ggcgagcccgacgaacgatttcccggctacgccgcgcagcgcgtgcgcggcgccatcctc
gacgagctgcgccgccaggactggcgcccgcgcagcgtgcgccaggaaggccatcgcctg
cgcgacggtatccgcgagttgcgacgccgcctcggccacgaaccttccgaggccgaggtg
atgcagcacctcggcgtgagcgccgaggactacctggcctacgagcagcacaccaacgcc
gagaccctggccagcttcgacgaagtgatcgaggagctgatgctcacgccctcggccgcg
cgcacgcccgaggccgagctgatccagcgccgttcgctggaacaggccctggcctgcttg
aacccgaaagagcagcacgtggtgcagctctattacgaagccgagctcagtctcaaggag
atcggcgccgtcatgggcctgaccgaggcccgcgtctgccagatcaacaaaagcgcattg
caaaagctgcgcggcgcgctctcgcccgactga
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