Hydrogenophaga sp. SNF1: SOM08_18840
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Entry
SOM08_18840 CDS
T10669
Name
(GenBank) SdrD B-like domain-containing protein
Organism
hydr Hydrogenophaga sp. SNF1
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF11
SdrD_B
CarboxypepD_reg
SpaA
DUF7619
DUF7507
bMG10
Dioxygenase_C
NPCBM_assoc
Motif
Other DBs
NCBI-ProteinID:
WQB83029
LinkDB
All DBs
Position
complement(3931256..3938044)
Genome browser
AA seq
2262 aa
AA seq
DB search
MKPYRTSMPQRALRRALLTAALGLMALGSAHAQLIISSIPDAPDPVPAGGTVTYTVRVAE
TNGTPLAGGAFSFSVPANGQYAGTGALPPGVSCSGMAEGQAGPGLLSCTGIALGPNAVAQ
VPLRVRSTLQGTLSVTATPTPGGAAQTELTTVNAGADLDLSLSAPANAPAGSTQSVVLSV
TNHGPDPSPSSLLSYSIPPGFALTGTPAGCSLAGGTLNCNLGAIAVNGSRSVTVSGIVGV
GGGSTLTHTADIAATGGVGDGVSDNNTRSTNTLVAPGSTVSVGKTKSASDPVATGTAFNF
TLAPRYSGDYPTGVQVLDNLPAAFCFAGGATSFTSGAWSCTASSACPTAAPVVSCTRSGG
GAAGANVDLGSIVIPVQAIATGAGVVNTATISAPGATPANGSVATTVIDPVSDLRANKAK
SWLQAAVPLNTPFDYTLSTTNLGPTPFPASGTLTITDTLPMGLRLNGIAAPTAFNCSSSA
GTSFPQAGPVTVTCTSSNLALAVDATTPGIALTVQATSTGGVLTNTACVASTGGPVDDNA
PNNCASVGVTPQTGVDLADVSALKRVIGAGDAPGNRQLAGQAVLWEIEVVNAGPATATNV
VVTDVFDSAFNASPADYSLSTLPGSATFGSCGVVATSSHLALDNCSIASLPACTPGLDCP
RIRVSARHFGNGTAADNHFEVINSAFVLAQQQGDPDLNNNNSANATAYYTARADVAVSKS
DNPDPVPAGQVLTYTITASNPSATSASRAYGVSITDTLPIGVVFLSATPSGGGSCTTAPA
AGATTTAGNRTLVCSWASIARGAQETVSLRVRPLASHSVVGGGSGSISNTVSVATTTPEI
AGGAANNSATQPTAVTTPVFDLLVNKTDDADPVDVGDDVTYTVTATNNGASTAENVVLTD
TLPAGAGAPTFVEVVAPLPPGVSCNTAGVTAGAAGGSIVCTIAQIGGTGAGSTGEPSSVA
VRIRLRGADKGQYTNQASVALADPTLNALDSQPGNNSKGEPTTFRFKADVQVVSKRAVRP
GTTTAITEVASSQTFDWLVDVRNNGPQAAETTSFTDALPAGLVLASAPSFTITAGSFTPA
AVSCTGGAGDTAVSCAIASMPANGTATVRIPVRFSGAPANGTVLTNTARLVTTGSGDSNG
GADPNGGNNFNSGSVTVQTSGVSGRVYHDRNANGHSEGGEPGVAATVTLTGTDQWGAPVS
LSTTADPVTGAYHFDVPPGTYTLALTRPGGWLPGLTQAGGVSGAGSSPGTVPTSGAGVTA
GPNGSDAPLIQTIVLDGAGAASTNNWFALLRAASLAGSVYLDQGLANGQRDPGESGVAGV
AVAITGTDFYGNAVTRALTTDADGRYAVTDLLPGSYQIDETQPADLADGAEHLGSVGGAP
RGSANPGGVNDRFGGVTLGSEEAGTDYDFGELGGQLGGHVYVDRDNDGQRDPGEPGIAGV
TITLSGTAANGVVVNRTAVTDATGRFQFDGLLPSDASGYTLTETQPAAYGDGLDTAGQVN
GAPMGQAGNDLITGIVHLGGAGDGYLFGERAASIEGSVFNDVAGNGVREPGDLPLAGVTI
TLTGTDADGHPVTRTVTTGADGSYRFDDLPLSDGAGYTLTQTQPPGYAQGGESVGSLGGS
VPGPNTLVVPLTTPGAQGTGYDFWERALAPSTLSGTVWQDSDNDRQRSPSEPVKAGWTVE
LLVCADGSASCAPADMIVLDSRLTASDGSYRFEQLVPGDYHLRFRTPSGQVIGGAWPTDP
VLNAAGGAHPTTPGMRPLPMIPVPIGAGMAVVNQDLPLDPSGIVYDSVTTQPVPGAVVEF
RGPPGFDPALHLLGGSASVTTAADGLYQFFLMPGAPAGEYTLVVTPPGGYVNSATHLPSA
GPLNAQTCTAPAGVVDPVPGDPCVVSTPTPLPGVPSPYFLSVLFPGGGAQNVVNNHLPLD
PVGGSLIELRKTTPKLTVKKGELVPYVITARNTRAVALADVVLVDTLPPGFKFVTGSLTV
QRLPGGAVEPVVPVVEGRRLTLPPRAFAPSETLRVSMVLGVGTGVGEGVYVNQVLAQQSA
TQAALSNTATASVRVVPDALFDCTDVIGKVYDDRNANGYQDEGEPGLPNVRLATVNGLLV
TTDPQGRYHIACAAVPKEGTGSNIVLKLDERTLPSGYRVTTENPAAERATRGKFVKINFG
TTVHRVVRLALRAEAFEPGATALKPAFAAELPKAIAALAERPSVLRLAYRAAPGEAPELA
EARARAVKADLLERWRRHGAAQPSPLFNLDIEVEHVSPSVAP
NT seq
6789 nt
NT seq
+upstream
nt +downstream
nt
atgaagccctaccgaacgtcgatgccgcagcgcgcgctgcgccgcgccctgctcaccgcg
gcccttggcctgatggcactgggcagcgcgcacgcccagctcatcatctccagcatcccc
gacgccccggacccggtgcccgcgggcggcaccgtcacctacacggtgcgcgttgccgaa
accaacggcacgccgctcgcgggcggcgccttcagcttcagcgtgccggccaacggccag
tacgccggcaccggcgcgctgcccccgggcgtgagctgcagcggcatggccgagggccag
gccggtccgggcctgctgagctgcaccggcatcgccctcggccccaacgcggtggcgcag
gtcccgctgcgcgtgcgctccaccctgcagggcacgctgtcggtgacggccacgcccacg
ccgggcggcgcggcgcagaccgagctgaccaccgtcaacgccggtgccgacctggacctg
tcgctcagcgcgccggccaacgcccccgccggcagcacgcagagcgtggtgctctccgtg
accaaccacgggcccgacccctcgcccagctcgctgctgagctacagcatcccgccgggc
ttcgcgctcacgggcacgcccgcgggctgctcgctggccggcggcacgctgaactgcaac
ctcggcgccatcgccgtcaatggctcgcgcagcgtcaccgtcagcggcatcgtgggcgtc
ggcggtggctccacgctcacgcacacggccgacatcgccgccacgggcggcgtgggcgac
ggcgtgtccgacaacaacacgcgcagcaccaacaccttggtggcgccgggcagcaccgtg
tcggtgggcaagaccaagtcggccagcgatccggtggccaccggtacggccttcaacttc
acgctcgcgccgcgctacagcggcgactaccccacgggcgtgcaggtgctcgacaacctg
cccgcggccttctgcttcgcgggcggcgccaccagcttcaccagcggcgcctggagctgc
accgcgtccagcgcctgccccacggccgcgccggtggtgtcgtgcacgcgcagcggcggc
ggggccgccggggccaacgtggacctgggcagcatcgtgattccggtgcaggccatcgcc
accggcgcgggggtggtcaacaccgccaccatctcggcgccgggcgccaccccggccaac
ggatcggtggccaccaccgtgatcgatccggtgtcggacctgcgcgccaacaaggccaag
agctggctgcaggccgccgtgccgctgaacaccccgttcgactacacgctgtccaccacc
aacctcgggcccacgcccttcccggccagcggcacgctcaccatcaccgatacgctgccc
atgggcctgcggctcaacggcatcgccgcgccgacggcattcaactgcagctccagcgcg
ggcaccagctttccgcaggccggcccggtcacggtcacctgcaccagcagcaacctggcg
ctggcggtcgacgccaccacgccgggcatcgcgcttaccgtgcaggccaccagcacgggc
ggcgtgctcaccaacaccgcctgcgtggccagcaccggcgggccggtggacgacaacgcg
ccgaacaactgcgcctcggtgggcgtcacgccgcagacgggcgtcgacctggccgacgtc
tccgcgctcaagcgcgtgatcggcgccggcgacgcgcccggcaaccgccagctcgcgggc
caagccgtgctgtgggagatcgaggtcgtcaacgccggcccggccacggccaccaacgtg
gtcgtcaccgacgtgttcgacagcgccttcaacgcctcgccggccgactacagcctgagc
accctgccgggcagcgccaccttcggcagctgcggcgtggtggcgacctccagccacctg
gcgctcgacaactgcagcatcgccagcctgccggcctgcaccccgggcctggactgcccg
cgcatccgcgtcagcgcgcgccacttcggcaatggcaccgcggccgacaaccacttcgag
gtcatcaactcggccttcgtgctcgcccagcagcagggcgacccggacctcaacaacaac
aactcggccaacgccaccgcctactacacggcgcgcgccgacgtggcggtgagcaaatcg
gacaaccccgacccggtgcccgcgggccaggtgcttacctacaccatcaccgcgagcaac
ccctcggccaccagcgccagccgcgcctatggcgtctccatcaccgacacgctgccgatc
ggcgtggtcttcctctcggccacgcccagcggcggcggcagctgcaccaccgcgccggcc
gcgggcgccaccaccacggcgggcaaccgcaccctggtctgcagctgggcctccatcgcg
cgcggcgcgcaggagacggtgagcctgcgcgtgcggcccctggcctcgcacagcgtggtc
ggcggcggcagcggcagcatcagcaacacggtgagcgtggccaccaccacgcccgagatc
gccggcggcgcggccaacaacagcgccacccagccgacggccgtgaccacgccggtgttc
gacctgctggtcaacaagacggacgacgccgacccggtggacgtgggcgacgacgtgacc
tacaccgtcaccgccaccaacaacggggcgtccacggccgagaacgtggtgctcaccgac
accctgcccgcgggcgcgggcgcgcccaccttcgtcgaggtggtggcgccgctgcccccg
ggcgtgagctgcaacaccgccggcgtcacggcgggcgcggccggcggcagcatcgtctgc
accatcgcgcagatcggcggcaccggcgccggctccaccggcgagccatccagcgtggcg
gtgcgcatccgcctgcgcggcgccgacaagggccagtacaccaaccaggccagcgtggcc
ctggccgatccgaccctgaacgcgctcgactcacagcccggcaacaacagcaagggcgag
ccgaccaccttccgcttcaaagccgacgtgcaggtggtgtccaagcgcgcggtgcgcccg
ggcaccaccaccgccatcaccgaggtggcgtcttcgcagaccttcgactggctggtcgat
gtgcgcaacaacggcccgcaggccgccgagaccaccagtttcaccgatgccctgcccgcg
ggcctggtgctcgccagcgcgcccagcttcaccatcaccgccggcagcttcacgcccgcc
gccgtgagctgcacgggcggggccggcgacaccgccgtgagctgcgccatcgccagcatg
ccggccaacggcacggccacggtgcgcatccccgtgcgcttcagtggcgcgccggccaac
ggcacggtgctcaccaacaccgcgcgcctcgtcaccaccggctcgggcgacagcaacggc
ggcgccgacccgaacggcggcaacaacttcaacagcggcagcgtgacggtgcagacctcg
ggcgtcagcggccgcgtctaccacgaccgcaacgccaacggccacagcgagggcggcgag
cccggcgtggcggccacggtcacgctcaccggcaccgaccagtggggcgcgccggtgagc
ctcagcaccaccgccgacccggtgacgggggcttaccacttcgacgtgccgccgggcacc
tacacgctcgcgctcacgcgccccggcggctggctgccgggcctcacccaggccggcggc
gtcagcggcgcgggctccagcccgggcacggtgcccaccagcggcgccggcgtcaccgcg
ggccccaacggctcggacgcgccgctgatccagaccatcgtgctcgacggcgccggcgcc
gcgtccaccaacaactggttcgcgctgctgcgcgccgccagcctggccggcagcgtctac
ctcgaccagggcctggccaacggccaacgcgacccgggtgagagcggcgtcgcgggtgtg
gcggtggccatcaccggcaccgacttctacggcaacgccgtcacgcgcgcgctgaccacc
gacgccgacggccgctacgccgtcaccgatctgctgcccggcagctaccagatcgacgag
acccagcccgccgacctcgccgatggcgccgagcacctgggcagcgtgggcggcgcgccg
cgcggcagcgccaaccccggtggcgtgaacgaccgcttcggcggcgtcacgctcggctcg
gaagaggctggcacggactacgacttcggcgaactcggcggccagctcggcggccacgtc
tacgtcgaccgcgacaacgacggccagcgagacccgggcgagcccggcatcgcgggcgtc
accatcaccctcagcggcacggcggccaacggcgtggtggtgaaccgcacggcggtgacc
gatgccaccggccgcttccagttcgacggcctgctgccctccgacgccagcggctacaca
ctcaccgagacccagcccgccgcctacggcgacggcctcgacacggccggccaggtgaac
ggcgcgcccatgggccaggccggcaacgacctcatcaccggcatcgtgcacctcggcggc
gcgggcgacggctacctgttcggcgagcgcgccgcctccatcgagggcagcgtgttcaac
gacgtggccggcaacggcgtgcgtgagcccggcgacctgccgctggcgggcgtgaccatc
accctcacgggcaccgacgccgacggccacccggtcacgcgcaccgtgaccacgggcgcc
gacggcagctaccgcttcgacgacctgccgctgtccgatggcgcgggctacaccctcacc
cagacccagccgccgggctacgcccagggcggcgagtcggtgggatcgctgggcggcagc
gtgcccggccccaacaccctggtggtgccgctgaccacgcccggcgcgcagggcaccggc
tatgacttctgggagcgcgcgctggcgccctccacgctgagcggcactgtctggcaggac
agcgacaacgaccgccaacgctcgcccagcgagcccgtgaaggccggctggacggtggag
ctgctggtctgcgccgacggcagcgccagctgcgcgccggcggacatgatcgtgctcgac
agccgcctcaccgcgtccgacggcagctaccgcttcgagcagctggtgccgggcgactac
cacctgcgttttcgcacgccctcggggcaggtgatcggcggcgcctggccgaccgacccg
gtgctcaacgccgctggtggcgcgcacccgaccacgccgggcatgcgcccgctgccgatg
atcccggtgcccatcggcgccggcatggccgtggtcaaccaggacctgcccctggacccc
agcggcatcgtctacgacagcgtgaccacgcagcccgtgcccggcgcggtggtggagttc
cgtggcccgcccggcttcgatcccgcgctgcacctgttgggcggcagcgccagcgtgacc
acggcggccgacgggctctaccagttcttcctcatgcccggcgcgccggcgggggagtac
acgctggtcgtcacgccgcccggcggctacgtcaactcggccacgcacctgccctcggcc
gggccgctgaacgcgcagacctgcacggcgcccgccggcgtggtggacccggtgccgggc
gacccctgcgtggtgtccacgcccacgccgctgcccggcgtgccctcgccgtacttcctg
agcgtgctgttcccggggggcggcgcgcagaacgtggtcaacaaccacctgccgctggac
ccggtggggggctcgctcatcgagctgcgcaagaccacgcccaagctcaccgtgaagaag
ggcgagctggtgccctacgtgatcaccgcgcgcaacacccgcgcggtcgccctggccgac
gtggtcctggtcgacaccctgccgccgggcttcaagttcgtcaccggttcgctcaccgtg
cagcggctgccgggcggcgccgtcgaacccgtggtgccggtggtcgaaggccgccgcctc
acgctgccgccgcgcgccttcgcgccgagcgagaccctgcgcgtgtccatggtgctcggc
gtgggcaccggggtgggtgagggcgtctacgtgaaccaggtgctggcccagcaatcggcc
acgcaggccgcgctgtccaacaccgccaccgcctcggtgcgcgtggtgcccgacgcgctg
ttcgactgcaccgacgtgatcggcaaggtctacgacgaccgcaacgccaacggctaccag
gacgagggcgagcccggcctgccgaacgtgcgcctggccacggtcaatggcctgctggtc
accaccgatccgcaggggcgctaccacatcgcctgcgcggcggtgcccaaggagggcacg
ggcagcaacatcgtgctcaagctggacgagcgcacgctgccctcgggctaccgcgtgacc
accgagaacccggcggccgagcgcgccacgcgcggcaagttcgtgaagatcaacttcggc
accacggtgcaccgcgtggtgcgcctggcgctgcgcgccgaggccttcgagcccggcgcc
accgcgctcaagccggccttcgcggccgagctgccgaaggccatcgcggccctggccgaa
cgcccctcggtgctgcgcctggcctaccgcgccgcgccgggcgaggcgcccgaactggcc
gaggcccgcgcccgcgccgtgaaggccgatctgctcgagcgctggcgccgccacggcgcc
gcgcagccgagccccctgttcaacctggacatcgaggtcgagcacgtgtcgccctccgtc
gccccctga
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