Hydrogenophaga sp. SNF1: SOM08_18870
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Entry
SOM08_18870 CDS
T10669
Name
(GenBank) substrate-binding domain-containing protein
KO
K10439
ribose transport system substrate-binding protein
Organism
hydr Hydrogenophaga sp. SNF1
Pathway
hydr02010
ABC transporters
hydr02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
hydr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SOM08_18870
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
SOM08_18870
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hydr02000
]
SOM08_18870
Transporters [BR:
hydr02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
SOM08_18870
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Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_3
Motif
Other DBs
NCBI-ProteinID:
WQB83035
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All DBs
Position
complement(3945433..3946395)
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AA seq
320 aa
AA seq
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MKYRSRLLALAAVAALGLSSPLLAQAQNKVNLGVAIPAATHSFAAGLVYWANEAKKELEK
DPNIKVTIKTASGAPEQANQLQDLVTATKIDSLVILPFESAALTRPVQQVKAKGVYVTVV
DRGLTDTSAQDAYVSGDNTAFGKVPAEYLAKFLNGKGNIVALRGIPTTIDNERMDAFTAV
MKNHPGIKILDAKHGNWNRDDAFKVMQDFLTRFKEIDAVWAADDDMAFGVLRAIEQAKRK
DIKIVFGGAGAKSMVKTLMDGSNPLIQANVSYSPKFLYEAIKMTALARRKGEKLPASTIV
PSVLITKQNAKDFYFPDSPF
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgaagtaccgttcccgtctgctcgcgctggccgccgtggccgcgctggggctgtccagc
ccgctgctggcgcaggcccagaacaaggtgaacctgggcgtggccatcccggccgccacc
cacagcttcgccgccggcctggtgtactgggccaacgaagcgaagaaggaactggagaag
gaccccaacatcaaggtcaccatcaagaccgccagcggggcgcccgagcaggccaaccag
ctgcaggacctggtgaccgcgaccaagatcgactcgctggtgatcctgcccttcgaatcg
gccgcgctcacgcgtccggtgcagcaggtcaaggccaagggcgtgtacgtgacggtggtc
gaccgcggcctgaccgacaccagcgcgcaggacgcctacgtctcgggcgacaacacggcc
ttcggcaaggtgccggccgagtacctggccaagttcctcaatggcaagggcaacatcgtc
gcgctgcgcggcatccccaccaccatcgacaacgagcgcatggacgccttcacggcggtc
atgaagaaccacccgggcatcaagatcctggacgccaagcacggcaactggaaccgcgac
gacgccttcaaggtgatgcaggacttcctcacgcgcttcaaggaaatcgacgccgtgtgg
gcggccgacgacgacatggccttcggcgtgctgcgcgccatcgagcaggccaagcgcaag
gacatcaagatcgtgttcggcggcgcgggcgccaagtccatggtcaagacgctcatggac
ggcagcaacccgctgatccaggccaacgtgtcctactcgcccaagttcctctacgaggcg
atcaagatgaccgcgctggcgcgccgcaagggcgagaagctgccggcctcgaccatcgtg
ccctcggtgctcatcaccaagcagaacgccaaggacttctacttcccggattcccctttc
taa
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