KEGG   Hydrogenophaga sp. SNF1: SOM08_19080
Entry
SOM08_19080       CDS       T10669                                 
Symbol
rplE
Name
(GenBank) 50S ribosomal protein L5
  KO
K02931  large subunit ribosomal protein L5
Organism
hydr  Hydrogenophaga sp. SNF1
Pathway
hydr03010  Ribosome
Brite
KEGG Orthology (KO) [BR:hydr00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    SOM08_19080 (rplE)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:hydr03011]
    SOM08_19080 (rplE)
Ribosome [BR:hydr03011]
 Ribosomal proteins
  Mitochondria/ Chloroplast
   Large subunit
    SOM08_19080 (rplE)
  Bacteria
    SOM08_19080 (rplE)
  Archaea
    SOM08_19080 (rplE)
SSDB
Motif
Pfam: Ribosomal_L5_C Ribosomal_L5 DUF1322
Other DBs
NCBI-ProteinID: WQB83075
LinkDB
Position
complement(3982315..3982854)
AA seq 179 aa
MARFKQHYAEKVAPELTKKFGYKSPMEVPRITKITLNMGVSEAVADKKVMDNAVGDLTKI
AGQKPVVTKAKKAIAGFKIREQQAIGCMVTLRGARMYEFLDRFVTVALPRVRDFRGISGR
SFDGRGNYNIGVKEQIIFPEIEYDKVDALRGLNISITTTAKTDEECKALLAGFRFPFKN
NT seq 540 nt   +upstreamnt  +downstreamnt
atggcacgtttcaagcaacactacgccgagaaggtggcgcccgagctgaccaagaagttc
ggctacaagtcgccgatggaggtgccgcgcatcaccaagatcacgctcaacatgggcgtg
agcgaggcggtcgccgacaagaaggtgatggacaacgccgtgggcgacctcaccaagatc
gctggccagaagcccgtcgtgaccaaggccaagaaggccatcgccggcttcaagatccgt
gagcaacaggccatcggctgcatggtcacgctgcgcggcgcccgcatgtacgaattcctt
gaccgcttcgtcaccgtggccctgccccgcgtgcgcgacttccgcggtatctcgggtcgt
tcgttcgatggccgtggcaactacaacatcggcgtcaaggaacagatcatcttccccgag
atcgagtacgacaaggtcgatgccctgcgtggcctgaacatcagcatcacgacgaccgcc
aagaccgacgaagagtgcaaggctctgctggcgggtttccgtttccccttcaagaactga

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