Hydrogenophaga sp. SNF1: SOM08_19080
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Entry
SOM08_19080 CDS
T10669
Symbol
rplE
Name
(GenBank) 50S ribosomal protein L5
KO
K02931
large subunit ribosomal protein L5
Organism
hydr Hydrogenophaga sp. SNF1
Pathway
hydr03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
hydr00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
SOM08_19080 (rplE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
hydr03011
]
SOM08_19080 (rplE)
Ribosome [BR:
hydr03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Large subunit
SOM08_19080 (rplE)
Bacteria
SOM08_19080 (rplE)
Archaea
SOM08_19080 (rplE)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_L5_C
Ribosomal_L5
DUF1322
Motif
Other DBs
NCBI-ProteinID:
WQB83075
LinkDB
All DBs
Position
complement(3982315..3982854)
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AA seq
179 aa
AA seq
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MARFKQHYAEKVAPELTKKFGYKSPMEVPRITKITLNMGVSEAVADKKVMDNAVGDLTKI
AGQKPVVTKAKKAIAGFKIREQQAIGCMVTLRGARMYEFLDRFVTVALPRVRDFRGISGR
SFDGRGNYNIGVKEQIIFPEIEYDKVDALRGLNISITTTAKTDEECKALLAGFRFPFKN
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
atggcacgtttcaagcaacactacgccgagaaggtggcgcccgagctgaccaagaagttc
ggctacaagtcgccgatggaggtgccgcgcatcaccaagatcacgctcaacatgggcgtg
agcgaggcggtcgccgacaagaaggtgatggacaacgccgtgggcgacctcaccaagatc
gctggccagaagcccgtcgtgaccaaggccaagaaggccatcgccggcttcaagatccgt
gagcaacaggccatcggctgcatggtcacgctgcgcggcgcccgcatgtacgaattcctt
gaccgcttcgtcaccgtggccctgccccgcgtgcgcgacttccgcggtatctcgggtcgt
tcgttcgatggccgtggcaactacaacatcggcgtcaaggaacagatcatcttccccgag
atcgagtacgacaaggtcgatgccctgcgtggcctgaacatcagcatcacgacgaccgcc
aagaccgacgaagagtgcaaggctctgctggcgggtttccgtttccccttcaagaactga
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