Hydrogenophaga sp. SNF1: SOM08_19910
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Entry
SOM08_19910 CDS
T10669
Name
(GenBank) tripartite tricarboxylate transporter substrate binding protein
KO
K07795
putative tricarboxylic transport membrane protein
Organism
hydr Hydrogenophaga sp. SNF1
Pathway
hydr02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
hydr00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SOM08_19910
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hydr02000
]
SOM08_19910
Transporters [BR:
hydr02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
SOM08_19910
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TctC
Motif
Other DBs
NCBI-ProteinID:
WQB83233
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All DBs
Position
4160261..4161232
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AA seq
323 aa
AA seq
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MSFLQRRRFLLRTTLAAATGLLIAGLAHAQAKYPSKPIEVVVPWPAGTSADVGMRTVSQA
LSKQLRVPVQVINKPGGQAVIGTAEFVKAAPDGYTLGSINIGPAVSQVIAGNAPYAMTDM
APIGIYNVLPFVVAAKADAPFKTMKELAAHAKGKEVILGNFGPGAVPTQSVVRMSGIDGW
KPKLVSYPSPGYTQLNAGDADVVTVESINIMGQVKAGNARVLVAMTPKRLPAFPEVPTAK
ELGYGFDVSIWTGLFAPKGTPPEIIQTLAKALDAALQDPLVKAYAEKSGTLFEHLSPEQT
SALMQQDAAWLRPVMESLGLVKK
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgagcttcctccagcggcgccgctttctgctgcgcaccaccctcgccgcggccaccggc
ctgctcatcgccggcctggcgcacgcgcaggccaagtaccccagcaagcccatcgaggtg
gtggtgccctggcccgccggcacctcggccgacgtcggcatgcgcaccgtctcgcaggcc
ctgagcaagcagctgcgcgtgccggtgcaggtgatcaacaagccgggcggccaggcggtc
atcggcaccgccgagttcgtgaaggccgcgcccgacggctacaccctgggctcgatcaac
atcggaccggccgtctcgcaggtgatcgccggcaacgcgccctacgccatgaccgacatg
gcgcccatcggcatctacaacgtgctgcccttcgtggtggccgccaaggccgacgcgccc
ttcaagaccatgaaggagctggccgcgcacgccaagggcaaggaagtgatcttgggcaac
ttcggtccgggcgccgtgcccacgcaaagcgtggtgcgcatgtccggcatcgacggctgg
aagcccaagctggtctcctacccctcgccgggctacacccagctcaatgcgggcgacgcc
gacgtggtgacggtcgagtcgatcaacatcatgggacaggtcaaggccggcaacgcgcgc
gtgctggtggccatgacgcccaagcgcctgcccgccttccccgaagtgccgaccgccaag
gagctgggctatggcttcgacgtgtcgatctggaccggcctgttcgcgcccaagggcaca
ccgcccgagatcatccagacgctggccaaggcgctcgacgccgcgctgcaagaccccctg
gtgaaggcctacgccgagaagtcgggcacgctgttcgagcacctctcgcccgagcagacc
agcgcgctgatgcagcaggacgcggcctggctgcgcccggtcatggaatcgctgggcctg
gtgaagaagtga
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