Hydrogenophaga sp. SNF1: SOM08_19920
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Entry
SOM08_19920 CDS
T10669
Name
(GenBank) tripartite tricarboxylate transporter permease
KO
K07793
putative tricarboxylic transport membrane protein
Organism
hydr Hydrogenophaga sp. SNF1
Pathway
hydr02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
hydr00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SOM08_19920
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hydr02000
]
SOM08_19920
Transporters [BR:
hydr02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
SOM08_19920
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TctA
DUF4112
Motif
Other DBs
NCBI-ProteinID:
WQB83235
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Position
4161737..4163257
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AA seq
506 aa
AA seq
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MSWFEPFMGFAGLAHPAVLLAVAVGALTGVVIGVLPGIGPGVAIAVMLPLTYGMNPLAGI
TLLLGIYVGAYYGGAVTSILIRTPGEASSIMTMFDGAPMAERGEAERALSLAFASAFVGG
IVSALVLAFVAAPVSQFTSRFGAAENFMAALLAMIFIARAYERQIGGAVMMIGLGLLIGT
VGIDPTSNEQRFTFGLTALQTGLPLVPVVIGLFGVAQALVLLSSPPGERTAEPMAAFGKP
RLEHFLEPLRYPRTLLRSLGIGTAIGILPGVGSALSTTMSYFAARRAAKQPESFGQGNPE
GIVAAETANNANSGGAMLTVLTLGIPGDAITAIIMGVFIVHGIVPGPTLFADQPELVYGI
FAALVSINIATLLLLLVLARPFARLSRLDPRWLGAAILALCFTGAYSTSSSMYGVWVALG
AGVLGWACALGRLPVIPLVLGLVLGDILESTLRQSLSVSSGSWSIFFTRPIAAALLAACA
LAVLQPLVRGLRLHRRARETREQASS
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgagctggttcgaacccttcatgggctttgcggggctggcccacccggccgtgctgctg
gccgtggccgtgggcgccctcaccggcgtggtgatcggcgtgctgcccggcatcggcccg
ggcgtggccatcgcggtgatgctgccgctgacctatggcatgaacccgctggccggcatc
acgctgctgctgggcatctacgtcggcgcgtactacggcggcgcggtcacctccatcctg
atccgcacgccgggcgaggcctcgtccatcatgaccatgttcgacggcgcgcccatggcc
gagcgcggcgaggccgagcgcgcgctgtcgctggccttcgcctcggccttcgtcggcggc
atcgtgagcgcgctggtgctggccttcgtcgccgcgccggtctcgcagttcaccagccgc
ttcggcgcggccgagaacttcatggccgcgctgctggccatgatcttcatcgcccgcgcc
tatgagcgccagatcggcggggcggtgatgatgatcggcctgggcctgctcatcggcacg
gtcggcatcgaccccacctccaacgagcagcgcttcaccttcggactcaccgcgctgcag
accggcctgcccctggtgccggtggtgatcggcctgttcggcgtggcgcaggccctggtg
ctgctgtccagtccgcccggcgagcgcacggcggagcccatggccgccttcggcaagccg
cggctggagcatttcctggagccgctgcgctacccgcgcaccctgctgcgttcgctgggc
atcggcacggccatcggcatcctgcccggcgtgggctcggcgctgtcgaccaccatgtcg
tacttcgctgcgcgccgcgccgcgaaacagcccgagagcttcggccagggcaaccccgag
ggcatcgtcgccgccgagaccgccaacaacgccaacagcggcggcgccatgctgaccgtg
ctcaccctgggcattcccggcgacgccatcaccgccatcatcatgggcgtgttcatcgtg
cacggcatcgtgccgggccccacgctgttcgccgaccaacccgagctggtctacggcatc
ttcgccgcgctggtgtcgatcaacatcgccaccctgctcctgctgctggtgctggcgcgg
ccgttcgcgcggctcagccggctcgacccgcgctggctgggcgcggcgatcctggccctg
tgcttcaccggcgcctactccaccagcagctccatgtacggcgtgtgggtcgcgctcggc
gcgggcgtgctcggctgggcctgcgccctgggccgcctgccggtgatcccgctggtgctg
ggcctggtgctgggcgacatcctggagtcgacgctgcgccagtcgctcagcgtctcctcc
gggtcctggtccattttcttcacgcgaccgatcgccgccgcgctgctggccgcctgcgcg
ctggccgttcttcagcccctggtgcgcggtctgcggctgcaccggcgagcgcgcgagacg
cgcgagcaagcctcttcgtaa
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