Hydrogenophaga sp. SNF1: SOM08_20040
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Entry
SOM08_20040 CDS
T10669
Name
(GenBank) RraA family protein
KO
K10218
4-hydroxy-4-methyl-2-oxoglutarate aldolase [EC:
4.1.3.17
]
Organism
hydr Hydrogenophaga sp. SNF1
Pathway
hydr00362
Benzoate degradation
hydr00660
C5-Branched dibasic acid metabolism
hydr01100
Metabolic pathways
hydr01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
hydr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00660 C5-Branched dibasic acid metabolism
SOM08_20040
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
SOM08_20040
Enzymes [BR:
hydr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.17 4-hydroxy-4-methyl-2-oxoglutarate aldolase
SOM08_20040
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Motif
Pfam:
RraA-like
Motif
Other DBs
NCBI-ProteinID:
WQB83258
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All DBs
Position
complement(4191462..4192109)
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AA seq
215 aa
AA seq
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MKELIDGFNQVAVASVADAVDKVCGKRGYMAACIKPRINDKRICGPAATVLEAATDEFVP
PQHALDLIDEAPAGSVIVISIEGGEPDVAVWGGLMTAGAVANGHVGAVLDGGVRDLTEIR
RDYGFPVYARDVSPGTTLGRYRTVASQVPVRVGDILVHPGDILVGDVDGVVVVPRAQAEE
VLKVAREIDERELEQAKLIIAEKSLRKGLAKYGRI
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaactgatcgacggattcaaccaggttgccgtggcctccgtggccgacgcggtg
gacaaggtctgcggcaagcgcggctacatggccgcctgcatcaagccgcgcatcaacgac
aagcgcatctgcgggccggccgccaccgtgctggaagcggccaccgacgaattcgtgccg
ccgcagcacgcgctggacctgatcgacgaggccccggcgggcagcgtcatcgtcatcagc
atcgagggcggcgagcccgacgtggcggtgtggggcggcctgatgaccgcgggcgccgtg
gccaatggccacgtgggtgccgtgctggacggcggcgtgcgcgacctcaccgagatccgc
cgcgactacggcttcccggtctatgcgcgcgacgtgagccccggcaccacgctgggccgc
taccgcaccgtggcctcgcaggtgccggtgcgcgtgggcgacatcctggtgcacccgggc
gacatcctggtgggcgacgtggacggcgtggtggtggtgccgcgcgcgcaggccgaagag
gtgctgaaggtagcgcgcgagatcgacgagcgcgaactcgagcaggccaagctcatcatc
gcggagaagtccttgcgcaagggcctggccaagtacggccgcatctga
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