Hydrogenophaga sp. SNF1: SOM08_20500
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Entry
SOM08_20500 CDS
T10669
Name
(GenBank) efflux RND transporter permease subunit
KO
K07788
multidrug efflux pump
Organism
hydr Hydrogenophaga sp. SNF1
Pathway
hydr02020
Two-component system
Brite
Transporters [BR:
hydr02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
SOM08_20500
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
WQB83347
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Position
complement(4285732..4288944)
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AA seq
1070 aa
AA seq
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MSAAPSLSRPFILRPVATSLLMLAVLIAGLLAWRQLPVSALPQVDYPVIQVFTFQPGASP
DVTARTVTAPLERRLGQIPGLAQMSSTSSGGASVITLKFALEVDLGVAEQDVQAALQSAN
SLLPSDLPAPPIYRKVNPADVPILTLAISSETLPLPRVVDLVDTRMAGQLSRLPGVGLVS
LAGGQRPAIRVMANSRALAANGLTLEELRTAIAAANNNQPKGSFDGELRSTMLDANDQLR
SVAEYRRLIVAWRDGAPLRLADVAQVEEGAEDRFLAAWAGMACVPGQAGGCGLAPAVLLN
IQRQPGANVIAVADQVRALLPQLTATLPATVKVQVVSDRTESIRASVRDVQKELLFAIAL
VVLVTFVFLRTPAATLIPSVAVPLSLVGTFAAMLLLGYSLNNLSLMALTIATGFVVDDAI
VMLENIARHREQGAGPMEAALKGASEIGFTLVSLTVSLVAVLIPLLFMADVVGRLFHEFA
VTLAVAIAISLVVSLTLTPMMAARLLPRPPAHGEDRDWQGERRAAPSSPAPLGGEAGLAP
VRGALDGTIERYGQALDWVLARQPLALLALAATLLLTGLLYLAVPKGFFPVQDAGAIQVV
TEAPQSVSFGAMAERQRALAEALLAEAPVQSIASYIGVDGSNATLNSGRMLITLAPHAQR
AVSAGELIERLRERARGVGGIQAWFQPVQELGMEDRISRTQYQFTLSSPDSALLAEWSER
LLQALAQRPELADVAGNLQREGLQAYLEVDRDAAARLGLRMSDIASALQSAFGQRQVSTL
FTHASQYRVVLESDDAARGGLQALEGVYVRPATGASGAADARPVPLSAVARAVERRAPLA
IEHQGQFPAVTLSFNLAPGHSLGEAVAAIDTVRRQIELPIAVELAFQGAAEGFRSSLTNT
LWLILAAVVVMYLVLGMLYESAVHPLTILSTLPSATVGALAALLLAGRPLDLIAVIGVVL
LIGLVKKNGIMMVDFALDAQRRLGLSPREAIHRAALLRFRPILMTTLAALFGAVPLMLAS
GSGAELRQPLGIVMVGGLVVSQVLTLFTTPVVYLAFDRLARRRAARAPLA
NT seq
3213 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccgcgccctcgctctcgcgccccttcatccttcggccggtggcgacctcgctg
ctgatgctggcggtgctgatcgccggcctgctggcctggcgccagctgccggtgtccgcg
ctgccacaggtggactacccggtcatccaggtcttcaccttccagcccggcgccagcccc
gacgtcaccgcgcgcaccgtcaccgcgccgctggagcgccggctcggccagatcccgggc
ctggcgcagatgtcgtccaccagttcgggcggcgcctcggtcatcaccctgaagttcgcg
ctggaggtggacctgggcgtggccgagcaggatgtgcaggccgcgctgcagagcgccaac
agcctgctgccgtccgacctgccggcgccgccgatctaccgcaaggtgaatccggcggac
gtgcccatcctcaccctggccatatcgtccgagaccctgccgctgccgcgcgtggtcgac
ctggtggacacgcgcatggcgggccagctctcgcgcctgcccggtgtcggcctggtcagc
ctggcgggcgggcagcgcccggccatccgggtgatggccaacagccgcgcgctggcggcc
aacggcctcaccctggaggagctgcgcacggccatcgccgccgccaacaacaaccagccc
aagggcagcttcgacggcgagctgcgcagcaccatgctcgacgccaacgaccagctgcgc
tcggtggccgagtaccggcgcctgatcgtggcctggcgcgacggcgcgccgctgcgcctg
gccgacgtggcccaggtggaagagggcgccgaggaccggttcctggccgcctgggccggc
atggcctgcgtcccgggccaggccggcggctgtggcctggcgccggccgtgctgctcaac
atccagcgccagcccggcgccaacgtcatcgccgtggccgaccaggtgcgcgcgctgctg
ccgcagctcacggccacgctgccggccacggtgaaggtgcaggtggtgtccgaccgcacc
gagagcatccgcgcctcggtgcgcgacgtgcagaaggagctgctgttcgccatcgcgctg
gtggtgctggtcaccttcgtcttcctgcgcacgccggcggccacgctcattcccagcgtg
gccgtgccgctgtcgctggtgggcacgttcgcggccatgctgctgctgggctactcgctc
aacaacctgagcctgatggcgctgaccatcgccaccggcttcgtggtggacgacgccatc
gtgatgctggagaacatcgcgcgccaccgcgagcagggcgcggggcccatggaggcggcg
ctcaagggcgccagcgagatcggcttcaccctggtctcgctcacggtctcgctggtggcg
gtgctgatcccgctgctgttcatggccgacgtggtgggccgcctgttccacgagttcgcc
gtcaccctggccgtggccatcgccatctccctggtggtctcgctcacgctcacgcccatg
atggccgcgcgcctgctgccgcgcccgcccgcgcacggcgaggatcgcgactggcagggc
gaacgccgggccgccccaagttcgcccgccccccttgggggggaagccgggcttgccccg
gtgcggggggcgcttgacggcaccatcgagcgctacggccaggcgctcgactgggtgctc
gcgcgccagcccctggccctgctggcgctggccgccacgctgctgctcaccggcctgctc
tacctggccgtgcccaagggcttcttcccggtgcaggacgcgggcgcgatccaggtggtg
accgaagcgccgcagagcgtgtccttcggtgccatggccgagcgccagcgcgcgctggcc
gaggcgctgctggccgaagcgccggtgcagagcatcgcgtcgtacatcggcgtggatggc
agcaacgccacgctcaacagcgggcgcatgctgatcacgctggcgccacacgcgcaacgc
gcggtctcggccggcgagctgatcgagcgcctgcgcgagcgcgcgcgcggcgtgggcggc
atccaggcctggttccagccggtgcaggagctgggcatggaagaccgcatcagccgcacg
cagtaccagttcaccctcagctcgcccgacagcgcgctgctggccgagtggagcgagcgc
ctgttgcaggccctggcgcagcggcccgagctggccgacgtggccggcaacctgcagcgc
gagggcctgcaggcctacctggaggtggaccgcgacgccgccgcccgcctgggcctgcgc
atgagcgacatcgcctccgcgttgcagagcgccttcggccagcgccaggtcagcaccctg
ttcacgcacgccagccaataccgcgtggtgctggagagcgacgacgcggcgcgcggtggc
ctgcaggcgctggagggggtgtacgtgcggcccgcgaccggtgcgagtggcgcggccgat
gcgcgtccggtgccactgtccgccgtggcgcgcgcggtggagcggcgcgcgccgctggcc
atcgagcaccagggccagttcccggccgtcaccctgtccttcaacctcgcgcccggccat
tcgctgggcgaggccgtggccgccatcgacaccgtgcggcgccagatcgagctgccgatc
gccgtggagctggccttccagggcgcggccgagggctttcgcagctcgctgaccaatacg
ctgtggttgatactggccgccgtggtggtgatgtacctggtgctgggcatgctgtacgaa
agcgcggtgcacccgctgaccatcctgtccacgctgccctcggccacggtgggcgcgctg
gccgcgctgctgctggcgggccggccgctggacctgatcgcggtgatcggcgtggtgctg
ctgatcggcctggtgaagaagaacgggatcatgatggtggacttcgcgctcgacgcccag
cgccgactgggcctgtcgccgcgcgaggcgatccaccgcgccgcgctgctgcgctttcgc
cccatcctcatgaccacgctggccgcgctgttcggtgccgtgcccctcatgctggccagc
ggctcgggcgccgagctgcgccagccgctgggcatcgtcatggtgggcggcctggtcgtg
agccaggtgctcaccctgttcaccacgccggtggtctacctggccttcgaccgcctggcg
cgccgccgcgccgcgcgcgccccgctggcctga
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