Hydrogenophaga sp. SNF1: SOM08_20610
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Entry
SOM08_20610 CDS
T10669
Name
(GenBank) TRAP transporter large permease
KO
K11690
TRAP-type transport system large permease protein
Organism
hydr Hydrogenophaga sp. SNF1
Pathway
hydr02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
hydr00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SOM08_20610
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hydr02000
]
SOM08_20610
Transporters [BR:
hydr02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
SOM08_20610
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DctM
Motif
Other DBs
NCBI-ProteinID:
WQB83369
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Position
complement(4311325..4312632)
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AA seq
435 aa
AA seq
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MLAVSLGFLVAFALIFLQVPIATALGLVGFGGVVVLNGWTPALSMAATITRDSTLVYTLI
VLPLFVLMGNLVAGAGISGDLFRAAQALIGRRRGGVAMATVAACGAFGAICGSSVATAAT
MGKVAIPEMRRLGYGDRLASAAVAAGGTLGILIPPSVIMVVYGVATQTHIGKLFAAGIVP
GLIAVVGYLLAVRYLVWRDPSQAPVNSERLAIDVPGLVRTLWPVVAIFGIVMGGIYGGLF
TSVEASGIGATAALLFALTRHNLTLAQIRGIFVDSASTSAMMFAIILGAALFGEFVNITG
VHEGLLAMVQGSGLSPFGVILAMIAIYLVLGCVLESLSMILLTVPIFFPIVTALGYDPVW
FGVLIVVVVEIGLITPPIGVNLFVIRSVTPDIAMGSIVRGVLPFITADLLRVLLIASVPA
LSLWLPNLLFKSTGG
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgctcgcggtctcccttggattcctggtcgccttcgcgctgatcttcctgcaggtgccg
atcgccactgccctcgggctggtgggcttcggcggcgtggtggtgctcaatggctggacg
cccgcgctcagcatggccgccaccatcacgcgcgacagcaccctggtctacacgctcatc
gtgctgccgctgttcgtgctcatgggcaatctggtggcgggcgccggcatctccggcgac
ctgttccgcgccgcgcaggcgctgatcggccggcgccgcggcggcgtggccatggccacg
gtcgcggcctgcggggcgttcggcgccatctgcggctccagcgtggccacggccgccacc
atgggcaaggtcgccattcccgagatgcgccgcctgggctacggcgaccggttggcctcg
gccgccgtggcggccggcggcacgctgggcattctgatcccgccctcggtgatcatggtg
gtgtacggcgtggccacacagacccacatcggcaagctgttcgcggccggcatcgtgccg
ggcctcatcgccgtcgtcggctacctgctggcggtgcgctacctggtctggcgcgaccct
tcgcaggcccccgtgaacagcgagcgcctggcgatcgacgtgcctgggctggtgcgcacg
ctgtggcccgtggtggcgatcttcggcatcgtcatgggcggcatctacggcggcctgttc
acctcggtcgaggcctcgggcatcggcgccacggcggcgctgctgttcgcgctcacgcgg
cacaacctcacgctggcgcagatccgcggcatcttcgtggacagcgcgagcacctcggcc
atgatgttcgccatcatcctgggcgcggccctgttcggcgagttcgtcaacatcaccggc
gtgcacgagggcttgctggccatggtgcagggcagcggcctgtcgcccttcggcgtcatc
ctggcgatgattgcgatctacctggtgctcggctgcgtgctcgagagcctgtccatgatc
ctgctgacggtgccgatcttctttcccatcgtcacggcgctgggctacgacccggtgtgg
ttcggtgtcctgatcgtggtggtggtggagatcggcctcatcacgccccccatcggcgtc
aacctgttcgtgatccgctcggtgacgcccgacatcgccatggggtccatcgtgcgcggc
gtgctgcccttcatcacggccgacctgctgcgcgtgctgctgatcgcctccgtgcccgcg
ctcagcctgtggctgcccaacctgttgttcaagagcaccggcggatga
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