Hydrogenophaga sp. SNF1: SOM08_20620
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Entry
SOM08_20620 CDS
T10669
Name
(GenBank) TRAP transporter substrate-binding protein
KO
K11688
TRAP-type transport system periplasmic protein
Organism
hydr Hydrogenophaga sp. SNF1
Pathway
hydr02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
hydr00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SOM08_20620
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hydr02000
]
SOM08_20620
Transporters [BR:
hydr02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
SOM08_20620
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctP
Motif
Other DBs
NCBI-ProteinID:
WQB83371
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All DBs
Position
complement(4313129..4314169)
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AA seq
346 aa
AA seq
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MISRTRRLVGALALIGAFAAAAPASAQTTVIKYSNWLPVGQAMRMEVIEPWIAEVEKVTA
GRVKIDTLPKVVGTLPAQFDVARDGQADLVVFIPGYTPNRFDILEALQMPFVSDNPEVLA
PLADRFFRKHLASYGEFKGVHPLSVYVVSPGQLFNNKRPLRSIADFKGLKFRSPQPSATQ
ALTLLGAVPVNKPVSETYELMSSGVLDGTLMPPESIPAFKLNDLVPYATIVPGAIYNTVL
VLGINEDKWKSLRAEDREAITRISGDAFAAKIGAAYAKGDRAAFDGLRKAGKSVETASPA
LVDEMKKVLAPVEKDWIEKAKKKGVADPQKLLDELRAEVAAASRGK
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgatttcccgcacccgccgcctcgtcggcgccttggcgctgatcggcgctttcgcggcc
gccgcgcccgcgtccgcccagaccacggtcatcaagtactccaactggctgccggtgggc
caggccatgcgcatggaggtgatcgagccctggatcgccgaggtggagaaggtcaccgcc
ggccgcgtgaagatcgacaccctgcccaaggtggtgggcacgctgcccgcgcagttcgac
gtggcgcgcgacggccaggccgacctggtggtcttcattccgggctacacgcccaaccgc
ttcgacatcctcgaggcgctgcagatgcccttcgtgagcgacaaccccgaggtgctcgcg
cccctcgccgaccgcttcttccgcaagcacctcgccagctatggcgagttcaagggcgtg
cacccgctgtcggtctacgtggtgtcgccgggccagctgttcaacaacaagcggccgctg
cgcagcatcgccgacttcaagggcctgaagttccgcagcccgcagcccagcgccacgcag
gcgctcacgctgctgggcgcggtgccggtgaacaagccggtgagcgagacctacgagttg
atgtcgtccggcgtgctcgacggcacgctgatgccacccgagtccatccccgccttcaag
ctcaacgaccttgtgccctacgccaccatcgtgccgggcgccatctacaacaccgtgctg
gtgctgggcatcaacgaagacaagtggaagtcgctgcgcgccgaggaccgggaggccatc
acgcgcatcagcggcgacgccttcgccgccaagatcggcgccgcctacgccaagggcgat
cgcgcggccttcgacggcctgcgcaaggcgggcaagagcgtggagaccgcgtcgcccgcg
ctggtggacgaaatgaagaaggtgctcgcgccggtcgaaaaggactggatcgagaaggcc
aagaaaaagggcgtggccgatccgcagaagctgctggacgagctgcgcgccgaggtggcc
gcggcctcgcgcgggaagtaa
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