Hydrogenophaga sp. SNF1: SOM08_20785
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Entry
SOM08_20785 CDS
T10669
Name
(GenBank) LysR substrate-binding domain-containing protein
KO
K27042
LysR family transcriptional regulator, trpBA operon transcriptional activator
Organism
hydr Hydrogenophaga sp. SNF1
Brite
KEGG Orthology (KO) [BR:
hydr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hydr03000
]
SOM08_20785
Transcription factors [BR:
hydr03000
]
Prokaryotic type
Helix-turn-helix
LysR family
SOM08_20785
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
MarR_2
Motif
Other DBs
NCBI-ProteinID:
WQB83404
LinkDB
All DBs
Position
complement(4349861..4350709)
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AA seq
282 aa
AA seq
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MTSLRAFEAAARLGSMTAAADELFVTHGAISRHVHLLEDQFGVPLLVRLPRSVAPTPEGA
ALAGQLTEAFRLMREAVARLAPGPLTLSCSATIMMKWLIPRLSEFKRANPSVEIRLNMSH
GEVDFIQDQISLAIRTSMNRPPQDVVIEPLQHEQIGPVCHPEYLARIGISSIASLARARI
LETATRTYAWKEWVALMNCEDIGLTPHERYEHFYLVIEAAVSQLGVALVPRYLVEKELES
GQLVAPFGFIQSPYTLNLWIAPHERLRDDVRQLARWIRERME
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
ttgacctccctgcgcgccttcgaggcggcggcccgcctgggctccatgacggccgcggcg
gacgagctgttcgtcacgcacggcgcgatcagccggcacgtgcacctgctcgaagaccag
ttcggcgtgcccctgctggtgcgcctgccgcgctccgtggcgcccacgccggagggcgcg
gccctggcggggcagctgacggaggcctttcgcctgatgcgcgaggccgtggcgcggctg
gcgcccgggccgctcacgctgtcgtgctccgccaccatcatgatgaagtggctgatcccg
cggctgagcgaattcaagcgcgccaaccccagcgtggaaatccggctcaacatgagccac
ggcgaggtggacttcatccaggaccagatcagcctggcgatccgcaccagcatgaaccgc
ccgccgcaggacgtggtgatcgagccgctgcagcacgagcagatcggcccggtgtgccat
cccgagtacctggcgcgcatcggcatctcctccatcgcgtcgctggcgcgcgcccgcatc
ctggaaaccgcgacgcgcacctacgcctggaaggagtgggtggcgctgatgaactgcgag
gacatcggcctcacgccgcacgagcgctacgagcacttctacctggtgatcgaggcggcg
gtgtcccagctgggcgtggcgctcgtgccgcgctacctggtggagaaggagcttgagtcg
ggccagctggtggcgcccttcggtttcatccagagcccgtacacgctcaacctgtggatc
gcgccgcacgagcgcctgcgcgacgatgtgcgccagctggcgcggtggatccgcgagcgc
atggagtga
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