Hydrogenophaga sp. SNF1: SOM08_21875
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Entry
SOM08_21875 CDS
T10669
Symbol
secD
Name
(GenBank) protein translocase subunit SecD
KO
K03072
preprotein translocase subunit SecD
Organism
hydr Hydrogenophaga sp. SNF1
Pathway
hydr03060
Protein export
hydr03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
hydr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
SOM08_21875 (secD)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
SOM08_21875 (secD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
hydr02044
]
SOM08_21875 (secD)
Secretion system [BR:
hydr02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
SOM08_21875 (secD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD-TM1
SecDF_P1_head
SecD_1st
SecD_SecF_C
MMPL
Sec_GG
ACR_tran
Motif
Other DBs
NCBI-ProteinID:
WQB83616
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Position
complement(4544100..4545983)
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AA seq
627 aa
AA seq
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MNRYPLWKYAIIVIALLVGAIYALPNLFGEAPAVQVSAAKATVRVDTGTVARVEQALSAA
SITPSALSLEGGSVRARFDDTDTQLKARDAIDRALNTDAADPSHVVALNLVPRTPAWLSA
LHARPMYLGLDLRGGVHFMLQVDMKAALERRADVLATDLRNALREKNIRHGGIQRSGQTI
ELRVRDEATRNAVVDLVRAQFTELVLNETAEGSDTRITATIRPEAARAVQDQALKQNMTT
LHNRINELGVAEPVIQQQGADRIVVQLPGVQDTAKAKDILGRTATLEVRLVDESADGLAA
ERGTGPVPFGSERYLERNGRPVIVKREVLLTGENLTDAQAGFDGQSHEPAVHLTLDSKGS
RIFRDVTRDNVGKRMAIILFEKGKGEVVTAPVIRTEIGGGRVQISGAMTTMEASDTALLL
RAGSLAAPMEIIEERTIGPSLGAENISKGFHSVTWGFLVVAAFMCVYYMMFGVFSAIALG
VNVLLLVAVLSMLQATLTLPGMAAMALALGMAIDANVLINERVREELRRGATPQAAINAG
YDRAWATIFDSNVTSLIAGLALLLFGSGPVRGFAVVHCLGILTSMFSAVFFSRGLVNFWY
GRQKKLKTISVGTVWRPEGDATPAKAD
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgatacccgctgtggaagtacgcgatcatcgtgatcgccctgttggtcggcgcg
atctacgcgctgcccaacctgttcggcgaggcgccggcggtgcaggtgtcggcggccaag
gccacggtgcgcgtggacacgggcacggtcgcgcgggtcgagcaggcgctgtcggcggcc
tcgatcacccccagcgcgctctcgctcgaaggcggctcggtgcgcgcgcgcttcgatgac
accgatacccagctgaaggcgcgcgatgccatcgaccgcgcgctcaacaccgacgccgcc
gatcccagccatgtggtggcgctgaacctggtgccgcgcacgccggcctggctgtcggcc
ctgcacgcccgccccatgtacctgggcctggacctgcgcggcggcgtccacttcatgctg
caggtggacatgaaggccgcgctggagcgccgcgccgacgtgctggccaccgacctgcgc
aacgccctgcgcgaaaagaacatccgccacggcggcatccagcgcagcggccagaccatc
gagctgcgcgtgcgcgacgaggccacgcgcaacgcggtggtcgacctggtgcgggcgcag
ttcaccgagctggtgctgaacgagacggccgagggcagcgacacgcgcatcaccgcgacc
atccgccccgaggccgcgcgcgccgtgcaggaccaggcgctcaagcagaacatgaccacc
ctgcacaaccggatcaacgagctcggcgtggccgagccggtgatccagcagcagggcgcc
gaccgcatcgtggtgcagctgccgggcgtgcaggacaccgccaaggccaaggacatcctg
ggtcgcaccgccacgctggaggtgcgcctggtcgacgagagcgccgatggactggccgcc
gagcgcggcacggggccggtgcctttcggctccgagcgctacctggagcgcaacggccgt
cccgtcatcgtcaagcgcgaggtgctgctcaccggcgagaacctcaccgacgcgcaggcc
ggcttcgacggccagtcgcacgagcccgcggtgcacctcacgctcgacagcaagggctcg
cgcatcttccgcgacgtcacgcgcgacaacgtgggcaagcgcatggccatcatcctgttc
gagaagggcaagggcgaggtcgtgacggcacccgtgatccgcaccgagatcggtggcggg
cgcgtgcagatttccggcgccatgaccaccatggaggccagcgacaccgcgctgctgctg
cgtgcgggctcgctggccgcgccgatggagatcatcgaggagcgcaccatcggccccagc
ctgggcgccgagaacatctccaagggcttccacagcgtgacctggggcttcttggtggtg
gcggccttcatgtgcgtctactacatgatgttcggcgtgttctccgccatcgcgctgggc
gtcaacgtgctgctgctggtggccgtgctgtccatgctgcaggccacgctcaccctgccc
ggcatggcggccatggcgctcgcgctgggcatggccatcgatgccaacgtgctcatcaac
gagcgggtgcgcgaggagctgcgccgtggggccacgccgcaggcggccatcaacgcgggc
tatgaccgcgcctgggcgaccatcttcgactccaacgtgacctctctgatcgcgggcctg
gcgctgctgctgttcggctcgggcccggtgcgcggcttcgccgtggtgcattgcctgggc
attctcaccagcatgttttccgccgtgttcttctcgcgcggcctggtgaacttctggtac
ggccgccagaagaagctcaagaccatctccgtcggcacggtgtggcgccccgagggcgac
gccacccccgccaaggccgactga
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