Hydrogenophaga sp. SNF1: SOM08_21975
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Entry
SOM08_21975 CDS
T10669
Symbol
gmd
Name
(GenBank) GDP-mannose 4,6-dehydratase
KO
K01711
GDPmannose 4,6-dehydratase [EC:
4.2.1.47
]
Organism
hydr Hydrogenophaga sp. SNF1
Pathway
hydr00051
Fructose and mannose metabolism
hydr00541
Biosynthesis of various nucleotide sugars
hydr01100
Metabolic pathways
hydr01250
Biosynthesis of nucleotide sugars
Module
hydr_M01016
GDP-L-Fuc biosynthesis, GDP-Man => GDP-L-Fuc
Brite
KEGG Orthology (KO) [BR:
hydr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00051 Fructose and mannose metabolism
SOM08_21975 (gmd)
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
SOM08_21975 (gmd)
Enzymes [BR:
hydr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.47 GDP-mannose 4,6-dehydratase
SOM08_21975 (gmd)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
Motif
Other DBs
NCBI-ProteinID:
WQB83636
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Position
4565232..4566383
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AA seq
383 aa
AA seq
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MTTNPPLPHAKPRVALITGVTGQDGSYLAELLLDKGYVVHGIKRRSSQFNTQRVDHIYQD
PHIDDARFHLHYGDLSDTSNLIRIVQETQPDEVYNLGAQSHVAVSFESPEYTADVDGMGT
LRLLEAIRILGLEKKTRFYQASTSELYGLVQEIPQKESTPFYPRSPYAVAKLYAYWIVVN
YREAYGMYACNGILFNHESPRRGETFVTRKITRGLAHIAQGLERCLYMGNLDSLRDWGHA
KDYVRMQWMMLQQERPEDFVIATGVQYSVRQFIDMAARELGITLRFEGEGANERAIVQAV
EGDQAPALRPGQVIVQVDPRYFRPTEVETLLGDPAKAKASLGWVPRIALREMVTEMVTAD
LAEARRHALLKTHGYAVAVSGEH
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccaacccgcccctcccccacgccaagccccgcgtcgccctcatcaccggcgtt
accggccaggacggctcctacctcgccgagctgctgctcgacaagggctacgtcgtgcac
ggcatcaaacgccgcagcagtcagttcaacacccagcgggtcgaccacatctaccaggac
ccgcacatcgacgacgcccgcttccacctgcactacggcgacctgagcgacaccagcaac
ctgatccgcatcgtgcaggaaacccagcccgacgaggtctacaacctcggcgcgcagagc
cacgtggcggtgagcttcgagagccccgagtacaccgccgacgtggacggcatgggcacg
ctgcgcctgctcgaggccatccgcatcctcgggctggagaagaagacgcgcttctaccag
gccagcacctccgagctgtacggcctggtacaggagattccgcagaaggaaagcacgccc
ttctacccgcgcagcccctacgcggtggccaagctctatgcgtactggatcgtggtgaac
taccgcgaggcctacggcatgtacgcctgcaacggcatcctgttcaaccacgagtccccg
cgccgcggcgagaccttcgtcacccgcaagatcacgcgcggcctggcccacatcgcgcag
ggactggagcgctgcctgtacatgggcaacctcgattcgctgcgcgactggggccacgcc
aaggactacgtgcgcatgcagtggatgatgctgcagcaggagcggcccgaggacttcgtc
atcgccaccggcgtgcagtacagcgtgcgccagttcatcgacatggccgcgcgcgaactg
ggcatcaccctgcgcttcgagggcgagggcgcgaacgaacgggccatcgtgcaggccgtc
gagggcgaccaggcgccggcgctgcggccgggccaggtgatcgtgcaggtggacccgcgc
tacttccgccccaccgaggtggagacgctgctgggcgacccggccaaggccaaggcctcg
ctgggctgggtgccgcggatcgccctgcgcgagatggtgacggagatggtgaccgccgac
ctggcggaggcccgccgccacgccctgctcaagacccacggctacgccgtggcggtgtcc
ggcgagcactga
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