Hydrogenophaga sp. SNF1: SOM08_22065
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Entry
SOM08_22065 CDS
T10669
Name
(GenBank) PAS domain S-box protein
KO
K11711
two-component system, LuxR family, sensor histidine kinase DctS [EC:
2.7.13.3
]
Organism
hydr Hydrogenophaga sp. SNF1
Pathway
hydr02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
hydr00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SOM08_22065
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
hydr01001
]
SOM08_22065
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
hydr02022
]
SOM08_22065
Enzymes [BR:
hydr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
SOM08_22065
Protein kinases [BR:
hydr01001
]
Histidine kinases
LuxR family [OT]
SOM08_22065
Two-component system [BR:
hydr02022
]
LuxR family
DctS-DctR (C4-dicarboxylate transport)
SOM08_22065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c
PAS
PAS_9
PAS_4
HisKA
PAS_8
Cecropin
DUF6338
LPG_synthase_TM
Motif
Other DBs
NCBI-ProteinID:
WQB83654
LinkDB
All DBs
Position
complement(4585342..4587402)
Genome browser
AA seq
686 aa
AA seq
DB search
MSRALKSPRWPLWGALLLLVAALLAVLVFLAAEYEVGRDQAALDQDATTVVGEIRSALLR
NVQTLQSLNAFSPTPTGWDAPAAELLAQRRELVRLEWRDPAMQVLAQRLSPYRPDVFDLL
PRSQALPEVRQACDAALRLSGPAYSASYFWPKRDGRGLEVMELCLPLSEAGESRGFLIAT
YSLPAMLAELTDAATLRGRGLSFVESDGARLAVHSVVPLQRRTLSAHALLDLPGHTLLLQ
LESPRRALGLFPNVLTGVVGALSLALLAVLALLARDMRRRQRAEQRAADALAFRKAMEDS
LVTGLRARDMSGRITYVNPAFCQMVGLSAEQLVGSGLPAPWWPPELVDEYQQRQAVRLAG
QTLPREGYESVFRRSDGTRFPVLIIEAPLIDAQGVQTGYMSAIIDLTEQRRIEELNRASQ
DKLQATARLATVGEMASLISHELNQPLAAIASYASGTLNLLQQGPQRGEDPVGDDIERAI
RRIAEQAERAGRVIRGVADFVRRRDQVREAVEPHLLIEGISTLLTLQAKKRGIRLQVEIA
PGTPRVWCDRTMVEQVLLNLARNGMQAMPLGDPGTASGLRVLRIAIAPVMGEAHEPGAGR
CARWVRVDVIDHGQGLPPEVAQRLFTPFFTTKAEGMGLGLSLCRTVVEQHGGALHFEPAL
PRGTRFSFTLPVAEAHAAQPLEAHAA
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
gtgagccgcgccctgaagtcgccccgctggccgctgtggggcgccttgctcctgctggtg
gccgcgctgctcgcggtgctggtgttcctggcggcggagtacgaggtggggcgcgaccag
gccgcgctcgaccaggacgccaccaccgtggtcggggagatccgcagcgcgctgctgcgc
aacgtgcagaccctgcagtcgctcaacgccttctcgcccacgcccacgggctgggacgcg
cccgccgccgagctgctggcgcagcggcgcgagctcgtgcggctggagtggcgcgacccg
gccatgcaggtgctggcgcagcgcctgtcgccctaccggcccgacgtgttcgacctgctg
ccgcgcagccaggccctgcctgaggtgcgccaggcctgcgacgcggccctgcgcctgtcg
gggcccgcctattccgccagctacttctggcccaagcgcgacggccgtggcctggaggtg
atggagctgtgcctgcccctgagcgaggccggcgagtcgcgcggctttctcatcgccacc
tattcgctgcccgccatgctggccgagctgaccgacgcggccacgctgcgcgggcgcggc
ctgagcttcgtggagagcgacggcgcgcggctggccgtgcacagcgtggtgccgttgcag
cggcgcaccctcagcgcgcacgccctgctcgacctgcccggccacaccctgctgctgcag
ctggagagtccgcgccgcgcgctcggcctgttccccaacgtgctcaccggcgtggtgggc
gcgctgtcgctggcgctgctggccgtgctggccctgctggcgcgcgacatgcgccggcgc
cagcgcgccgagcagcgcgcggccgacgccctggcctttcgcaaggccatggaggactcg
ctggtcaccggcctgcgcgcgcgcgacatgagcgggcgcatcacctacgtgaacccggcc
ttctgccagatggtgggcctgagcgccgagcaactcgtgggcagcggcctgcccgcgccc
tggtggccgcccgagctggtggacgagtaccagcagcgccaggccgtgcgcctggccggg
cagaccctgccgcgcgaaggctacgaatcggtgttccgccgcagcgacggcacgcgcttt
ccggtcctcatcatcgaggccccgctgatcgacgcgcagggcgtgcagaccggctacatg
agcgccatcatcgacctcaccgagcagcgccgcatcgaggagctcaaccgcgcctcgcag
gacaagctgcaggccacggcgcgcctggccacggtgggcgagatggcctcgctcatcagc
cacgaactcaaccagccgctggccgccatcgccagctacgccagcggcacgctcaacctg
ctgcagcaggggccgcaacggggcgaggacccggtgggcgacgacatcgagcgcgccatc
cggcgcatcgccgagcaggccgagcgcgcgggccgcgtgatccgcggcgtggccgacttc
gtgcgccgccgcgaccaggtgcgcgaggcggtggagccgcatctcctgatcgagggcatc
tccacgctgctgacgctgcaggccaagaagcgcggcatccggctgcaggtggagatcgcg
cccggcacgccgcgcgtgtggtgcgaccgcaccatggtcgaacaggtgctgctcaacctc
gcgcgcaacggcatgcaggccatgccgctgggcgacccgggcacggccagcggcctgcgc
gtgctgcgcatcgccatcgcgccggtgatgggcgaggcccacgagccgggcgcggggcgc
tgcgcgcgctgggtgcgcgtggacgtgatcgaccacggccagggcctgccgcccgaggtg
gcccagcgcctgttcacgcccttcttcaccaccaaggccgagggcatgggcctgggcctg
agcctgtgccgcaccgtggtggagcagcacggcggcgccctgcacttcgagccggccttg
ccgcgcggcacgcgcttttccttcacgctgcccgtggccgaggcgcacgcggcgcagccg
ctggaggcccacgccgcctga
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