Hymenobacter sp. DG25A: AM218_01010
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Entry
AM218_01010 CDS
T04064
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
hye
Hymenobacter sp. DG25A
Pathway
hye03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hye00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AM218_01010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hye03021
]
AM218_01010
03400 DNA repair and recombination proteins [BR:
hye03400
]
AM218_01010
Enzymes [BR:
hye01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AM218_01010
Transcription machinery [BR:
hye03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AM218_01010
DNA repair and recombination proteins [BR:
hye03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AM218_01010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
ALD20068
UniProt:
A0A0M4HI86
LinkDB
All DBs
Position
232628..233617
Genome browser
AA seq
329 aa
AA seq
DB search
MSILAFQMPEKVVMEKSDDFYGTFEFKPLEKGYGVTIGNALRRILLSSLEGYAITSVRTS
SVLHEFMTIEGVIEDMSEIILNLKQVRFKKVSDAIEDKITVRIKGNEVFTAGEINNFTTG
FQVLNPELVICNVDPSKELEFEFTIQKGRGYVPAEENKPADQVFGQIAIDAIFTPIKNVK
YSIENTRVEQKTDYEKLLIEIQTDGSIHPEDALKGAANILIQHFMLFSDSTMTFETAKAE
EEETVDEETLHMRKVLKTPLADMDLSVRAYNCLKAADIKTLGDLVQLDMADMMKFRNFGK
KSLTELENLVEEKGLTFGMDLGKYKLDEE
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatcttagcttttcaaatgccggagaaagtcgtgatggaaaagtccgacgacttc
tacggaacgtttgaattcaaaccgctggagaaaggctacggcgtcacgatcggcaacgct
ttgcgccgcatcctgctgtcgtcgctggagggctatgccatcacgtcggttcgcacgtcc
agcgtactgcacgagttcatgaccatcgagggcgtgattgaggatatgtccgaaatcatt
ctcaacctgaagcaggtccgcttcaagaaggtgagcgatgccatcgaagacaaaatcact
gttcgtatcaaaggcaatgaagttttcacggccggcgaaataaacaacttcaccacgggc
ttccaggtcctgaacccggagctggtgatctgcaacgtagaccccagcaaagagctggag
tttgagttcacgattcagaaaggccgcggctacgttcctgcagaggaaaacaagcctgct
gatcaggttttcggacagattgccattgatgccatcttcacgcctatcaaaaacgtgaag
tatagcattgagaacacccgcgttgagcagaagaccgactacgagaagctgctcatcgaa
attcagacggatggctccattcacccggaggatgcactgaaaggtgctgccaacattctg
attcaacacttcatgctgttctccgacagcaccatgacctttgaaacggctaaggctgaa
gaagaggagacagtggatgaagaaaccctgcacatgcgcaaggttctaaagaccccgctg
gctgacatggacctgtcggtgcgtgcttacaactgcctcaaggctgccgatatcaaaacc
ctcggtgacctggtgcagctggacatggctgacatgatgaagttccgcaacttcggtaag
aagtcactgacagagcttgaaaacctagtagaggaaaagggtctgaccttcgggatggat
ctgggcaagtacaagctcgacgaagaatag
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