Hymenobacter sp. DG25A: AM218_03410
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Entry
AM218_03410 CDS
T04064
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
hye
Hymenobacter sp. DG25A
Brite
KEGG Orthology (KO) [BR:
hye00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hye03016
]
AM218_03410
Enzymes [BR:
hye01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
AM218_03410
Transfer RNA biogenesis [BR:
hye03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
AM218_03410
Prokaryotic type
AM218_03410
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Lactamase_B_4
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
ALD20437
UniProt:
A0A0M4HCH8
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All DBs
Position
complement(820904..821839)
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AA seq
311 aa
AA seq
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MEFELRILGSGSATPVPNRHHTAQVLTVGNMLYLLDCGEGTQRRLLEHKISPHRLKVIFI
SHLHGDHFFGLFGLLGTMHLQGRTEPLRLFGPAGLDEVLTTQFRHSGTELGFELEYTLID
PAQHLLVYEDRNVTVHTMPMHHRIPCCGYLFREQPRRRSLVRELLPAGLTPPQLHQLSQG
EDVVDETTGALLVRHADVAGPPKHARSYAFCSDTVFTPSMAEMVHKVDILYHEATFLEEL
RERAAVTLHSTARQAGELARIADVGQLLIGHFSSRYRDLEPLLREARTEFSNTQLALEGT
IVSVPTTAILV
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
ttggagtttgagctaagaatactaggcagtggttcggccacgccggttcccaatcgtcat
cacacggcccaagttctgaccgtgggcaacatgctgtacctgctggactgcggcgagggt
acgcagcggcggctgctggagcacaagatcagtccccaccgcctcaaggttatctttatc
agccacctgcacggcgaccatttctttgggctgtttggcctgctgggcaccatgcacctg
cagggccgcaccgagccgcttcgcctgtttggccccgccggcctggatgaagtcctgacc
acgcaatttcgccactccggcaccgagctgggctttgagctggagtacaccctgattgac
cccgcccagcacctgctggtgtatgaggaccgtaacgtaacggtgcataccatgcccatg
caccaccgcattccgtgctgcggctacctgttccgggagcagccgcgccgccgctccctg
gtgcgggagctgctgcccgctggcctcaccccaccccagctgcaccagctttcccaaggc
gaagatgtggtagatgagactacgggtgccttactggtgcgccacgccgatgtggccggc
ccgcccaaacacgcccgcagctatgccttctgctccgataccgtcttcaccccttctatg
gctgagatggtgcacaaagtggatatcctctaccatgaagccactttcctggaggaactc
cgggaacgggccgcggtaacgctgcactccaccgcccgccaggccggcgagctggcccgg
attgcagacgttgggcaactgctcatcgggcacttttcctcccgctaccgcgacctggaa
cccctgctgcgcgaagcccgcacggagttttccaacacgcagctggcgctggaaggcacg
attgtcagtgtgcccaccacggccattctggtttaa
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