Hymenobacter sp. DG25A: AM218_05470
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Entry
AM218_05470 CDS
T04064
Name
(GenBank) RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
hye
Hymenobacter sp. DG25A
Pathway
hye03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hye00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AM218_05470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hye03019
]
AM218_05470
03009 Ribosome biogenesis [BR:
hye03009
]
AM218_05470
Enzymes [BR:
hye01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AM218_05470
Messenger RNA biogenesis [BR:
hye03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AM218_05470
Ribosome biogenesis [BR:
hye03009
]
Prokaryotic type
rRNA helicases
AM218_05470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Motif
Other DBs
NCBI-ProteinID:
ALD20769
UniProt:
A0A0M3RV27
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All DBs
Position
1267205..1269175
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AA seq
656 aa
AA seq
DB search
MEKESEKMKFSELTLSEEMQRAIAEVGYEEASPIQAAGIPVLLQGRDVIGQAQTGTGKTA
AFSIPAIERVDTDSREVQCLVLCPTRELAVQVSGEIQKLGKYKKGLAVVPIYGGSSYDRQ
FRALERGVQIVIGTPGRVMDHIERGTLKLDSCKMIILDEADEMLDMGFRDDIETVLKKMP
EERQTVFFSATMSKPIMEMTKRYQKDPQIVKVNHQEMTVTNIEQSYFEVRGPQKKDVLTR
LIDMYNIKSGIVFANTKRMVDEIVGDLQAKGYFAEGLHGDMGQQQRQNTLDKFRKGTLEI
LVATDVAARGIDVENVEVVVNYDLPADEEYYVHRIGRTGRAGKLGKAFTFVSGRDIYKLR
DIMRFTKATIKQERVPSFEDVSEVKTTLMLNSIKEIIVKGNLDKYIARVQRLIDQDQEEA
VTSLDVAAALLKMTMKEDKRAQESLDASRTQGAARAGFTRLFVTMGKKDRLHPRDIVDLI
AENTSLMASKVGDIALYDKFSFVEVPNEFVQEIIDQLGRSSIQGRPVAFNIATPRQEGDA
QQEGNTRGFGGANENRPARRGPGGFGGGERREGGSSYGGGNRGGSSYGGGYKGGERREGG
SSFGGNRGGSSYGGGGYKGGDRREGGSGYGGGGYKGGSGSSSGGYKGKRDGQGFGE
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaagaatcggaaaaaatgaagttcagtgagctgacgctctctgaagaaatgcag
cgcgctattgcggaagtaggctacgaggaagcatcccccattcaggcagccggtatcccg
gtattgctccagggccgcgacgtaattggccaagcccagacgggtaccggcaaaactgcc
gccttctcaatccccgccattgagcgcgttgatacggactcccgcgaagtgcagtgcctg
gtgctctgccccacccgcgagctggccgtgcaggtttccggcgaaatccagaagctgggc
aaatacaagaaaggcctggccgtagtgcctatctacggcggctccagctacgaccggcag
ttccgcgccctggagcgcggtgtgcagattgtaattggtacccccggccgcgtaatggac
cacattgagcgtggtaccctgaagctcgactcctgcaaaatgatcatcctcgatgaggcg
gacgaaatgctggacatgggcttccgcgacgacatcgagacggtgttgaagaagatgcct
gaggagcgccagacggtattcttctccgccacgatgagcaagcccatcatggagatgacc
aagcgctaccagaaggatccgcagatcgtgaaggtaaaccatcaggaaatgacggttacc
aacatcgagcagagctacttcgaggtgcgtggtccccagaagaaggacgttctgacgcgt
ctcatcgacatgtacaacatcaagtcgggcatcgtcttcgctaacacgaagcgcatggta
gacgagattgtgggcgacctgcaggctaaaggctatttcgccgaaggtctgcacggcgac
atgggccagcagcagcgccagaacacgctggataaattccgcaaaggcacgctggaaatc
ctcgtagccaccgacgtagccgcccgcggcatcgacgtggaaaacgtggaagtagtagta
aactacgacctgcccgccgacgaagaatactacgtacaccgcatcggccgtaccggccgc
gctggtaagctgggcaaagccttcaccttcgtgagcggccgcgacatctataagctgcgt
gatatcatgcgcttcaccaaagccaccatcaagcaggagcgcgtgccttccttcgaagat
gtgtcggaggtgaaaaccacgctcatgctcaactccattaaggagattattgtaaagggc
aacctggacaagtacattgcccgcgtacaacgcctgattgatcaggaccaggaagaagca
gttacgtccctggacgtagccgcggccctgctcaaaatgaccatgaaggaagacaagcgt
gcgcaggaaagtctggatgccagccgcacccagggtgctgcccgcgccggcttcacgcgc
ctcttcgttaccatgggtaagaaggaccgcctgcacccccgcgacattgtagacctcatt
gctgaaaacaccagccttatggccagcaaagtaggcgacattgctctgtacgacaagttc
agcttcgtagaagtgccgaatgagtttgtgcaggaaatcattgatcagctcggccgcagc
tccattcagggccgtccggtagccttcaacattgctacgccgcgccaggaaggtgatgcg
cagcaggaaggcaacacccgcggcttcggcggtgctaatgagaaccgtccggcccgtcgt
ggccccggtggatttggtggtggcgagcgtcgcgaaggcggcagcagctatggcggtggt
aaccgcggtggcagcagctacggtggcggctacaaaggtggcgagcgtcgtgaaggcggc
agcagcttcggtggcaaccggggtggcagcagctacggcggcggtggctacaaaggcggt
gaccgtcgcgaaggcggcagcggctacggcggcggtggctacaaaggcggcagcggtagc
agctcaggcggctacaaaggcaagcgcgacggccagggcttcggcgaatag
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