Hymenobacter sp. DG25A: AM218_06535
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Entry
AM218_06535 CDS
T04064
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
hye
Hymenobacter sp. DG25A
Brite
KEGG Orthology (KO) [BR:
hye00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hye03032
]
AM218_06535
03400 DNA repair and recombination proteins [BR:
hye03400
]
AM218_06535
Enzymes [BR:
hye01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
AM218_06535
DNA replication proteins [BR:
hye03032
]
Prokaryotic type
DNA Topoisomerases
AM218_06535
DNA repair and recombination proteins [BR:
hye03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AM218_06535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
ALD20948
UniProt:
A0A0M4I4S0
LinkDB
All DBs
Position
complement(1509846..1510982)
Genome browser
AA seq
378 aa
AA seq
DB search
MPTTDAQPRLKIKKKYLLAEEEAHVLYKNPARQAELAGLRYYNDTHPGLTRRTTRAGNFT
YHDARGQKITEEKTLARINGFVIPPAWTDIWIAPTATAHLQVTGRDAKGRKQYIYHPAWD
HARSFTKFSRLQAFGEKLADLRQQLHKDLARPQLDKRKVIALVLSLMDQSFIRIGSREYA
RKNKSYGLTTLRDRHVQVAGAEVRFKFVGKKGVAHDVLIQDRKLARLVQKCKEIPGQHLF
QYYDSEGNRVEVESGDVNGYLREVTGLSLSAKDFRTWGGTVKMVECLEAVLNEHPEFPKP
RTLKHAVKEVAQNLGNTPTVCSKYYIHPQVVDLFNSDKLLDYLRRHDADPAESDLLTPTE
HMVLHMLQELGPAAAGGK
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgcctacaactgatgcccaaccccggctgaaaatcaaaaagaagtacctcctggccgag
gaagaagcccatgtactttataaaaacccggcccggcaggcagaactggccgggctgcgc
tattacaacgatactcaccccggcctcacgcgccgcactacccgggcgggcaattttact
taccacgatgccaggggccagaaaataacggaggagaaaacgctggcccgcatcaacggc
ttcgtgattcccccggcctggacggatatttggatagcacccaccgccacggcccacctg
caggtaaccgggcgcgatgccaaaggccgcaagcagtatatctaccatccggcctgggac
cacgcgcgcagcttcaccaagttcagccggctgcaggcatttggcgagaagctggccgac
ctgcgccaacagctacacaaggacctggctcgcccgcagctagataagcgcaaggttatt
gccctggtgctttccctcatggaccagtctttcatccgcatcggcagccgggaatacgcc
cgcaaaaacaaaagctacggcctcaccaccctccgcgaccggcacgtgcaggtggccggg
gctgaggtgcggtttaagtttgtgggcaagaaaggtgtggcgcacgatgtcctgattcag
gaccggaagctggcccgcctggtgcagaagtgcaaggaaattcccggccagcaccttttt
cagtactacgacagcgaaggcaaccgcgtggaagtagaatcaggggacgtgaacggctac
ctgcgggaggttaccggcctgagcctctcggccaaagacttccgcacctggggcggcacc
gtaaaaatggtggaatgcctggaggccgtgctgaacgagcatccggagtttcccaagccc
agaaccctgaagcatgccgtgaaggaagtggcccagaacctggggaatacccccacagtg
tgctccaaatactatatccaccctcaggtggtagacctgtttaactccgataagctcctg
gactacctgcgccgccacgacgccgaccccgccgaaagtgacctgctcacgcccaccgag
cacatggtgctgcacatgctgcaggaactgggcccagccgctgccggcggcaaataa
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