Hymenobacter sp. DG25A: AM218_07585
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Entry
AM218_07585 CDS
T04064
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
hye
Hymenobacter sp. DG25A
Brite
KEGG Orthology (KO) [BR:
hye00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hye03032
]
AM218_07585
03400 DNA repair and recombination proteins [BR:
hye03400
]
AM218_07585
Enzymes [BR:
hye01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
AM218_07585
DNA replication proteins [BR:
hye03032
]
Prokaryotic type
DNA Topoisomerases
AM218_07585
DNA repair and recombination proteins [BR:
hye03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AM218_07585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Motif
Other DBs
NCBI-ProteinID:
ALD21104
UniProt:
A0A0M4HNK0
LinkDB
All DBs
Position
1752298..1754760
Genome browser
AA seq
820 aa
AA seq
DB search
MVKNLVIVESPAKAKTIEGYLGKDFIVKSSFGHVRDLPKDNNAIDIANGFKPTYVVSPDK
REIISQLKKLAKEAEMVWLASDDDREGEAISWHLSETLNLTEAKTKRIVFREITKNAILN
AIANPREIDLNLVNAQQARRVLDRLVGFELSPVLWKKVKAGLSAGRVQSVAVRLVVERER
EINQFKTSSAYRVVAKFDAGQGAVLEAELPTRYKTREEAEAFLARCVGAAYRIENLEKKP
GKRTPAPPFTTSTLQQEASRKLGFSVAQTMSVAQKLYEAGRISYMRTDSLNLSQDAIAAA
KEEITRAYGTEYAHTRQFKTKSASAQEAHEAIRPTDFALAKAGSDSAEQRLYDLIRKRAM
ASQMADATVERTVATIGISTQPGVTLTATGEVITFEGFLKAYSESKDEDEQDGESSFSRG
LPPISVGQVLPLQQLRATERYASPTARYTEASLVKKLEEMGIGRPSTYAPTISTIQKRGY
VEKDTREGKERKFHVLTLDGDTVKTEVKTETYGADKAKLFPTDTAMVVNDFLVEHFPVIV
DYKFTAKVEDEFDQIANGHEQWEKMIAGFYGTFHETVERGQDIERSTLGSTRVIGLHPET
GQKLTARLGRFGPYVQIEPKEGAPEGEKAVYASLRKGQFIENITLEDALELFKLPRNVGQ
FEDKDMTAALGRFGPYIRHDSKFYSLTKEQDPHTITADEAVALIENKRKTDAERLIKEFP
GREDVQVLNGRFGPYIVVGKKNVKIPKGEEPADLTLERCLELAEATPDKPAKGGRFAKKA
APAASEKTDTPVKKAAAKKPAAKKPAAKKPAATKAAGKPK
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atggttaagaacctagtcatagtagagtctcctgccaaagccaaaaccattgaagggtac
ttgggcaaggactttatcgtcaaatccagctttgggcacgtccgcgacctgcccaaggac
aataatgctattgatattgccaacggcttcaaacccacctacgtagtctcacctgataag
cgggaaatcatctcccagctgaaaaagctagccaaggaagccgaaatggtgtggttagca
agtgacgatgaccgggagggcgaagccatttcctggcatctttccgagacgctgaacctg
acggaggccaagaccaagcgcattgttttccgtgaaatcacgaaaaatgccattctcaac
gccattgccaatccccgggaaatcgacctgaatctggtaaatgcccagcaggcccgccgc
gtgctggaccgcctggtaggctttgagttgagcccggtgctctggaaaaaggtgaaagcc
ggcctttcagcgggccgtgtgcaaagtgtggccgtgcgactggtggtggagcgggaacgg
gaaatcaaccagttcaaaacctcttcggcctaccgcgtagtagccaaatttgatgccggc
cagggcgccgtattggaggccgagctgcccacccgctacaaaacccgcgaagaggccgag
gccttcctggcgcgctgcgttggcgccgcctaccgcattgagaacctggagaagaagccg
ggcaaacgcacaccggcgccaccgtttaccacttctaccctgcagcaggaagcctcgcgc
aagctgggcttctcggtagcgcagaccatgagcgtggcccagaagctgtatgaagcaggt
agaatcagctacatgcgtaccgactctctgaacctctcgcaggacgccatagcagcggcc
aaggaggagattacgcgggcctacggtactgaatatgcgcacacccgtcagtttaagact
aaatccgcctccgcgcaggaagcccacgaagccattcgccccacggattttgcgctggcc
aaggccggctccgattcggcggagcagcgcctgtatgatttgatccgcaaacgggctatg
gcttctcagatggccgatgccaccgtggagcgtaccgtagccaccattggcatcagcacg
cagccgggcgttacgctcacggctaccggcgaagtcattacgtttgagggctttctgaag
gcgtacagtgagtcgaaggacgaggatgagcaggatggcgagtcgtcgttttcacgcggt
ttgccgccaatttcagtgggccaggtgctgccgctgcagcagctgcgcgctacggagcgc
tacgcttcgccgactgcccgctacacggaagcttcgctggtgaaaaaactggaggaaatg
ggcattggtcgtccttctacctatgcccctactatcagcaccattcagaagcgcggctac
gtggaaaaagacacccgggagggcaaggagcgcaagttccatgtgctgacgctggatggc
gacacggtaaaaaccgaagtgaaaacggaaacctacggggccgacaaagccaagctgttc
cccacggatacggccatggtggtaaacgactttctggtggagcatttccccgtgattgta
gactataagtttacggccaaggtggaagacgaattcgaccagattgccaacggccatgag
cagtgggaaaagatgattgccgggttctatggcactttccacgaaaccgtggagcgcggc
caggatattgagcgcagcacgctgggctctacccgcgttatcggcctgcacccggaaacc
ggccagaagctgacggcccgcctgggccgctttgggccttacgtgcagattgagcccaaa
gaaggtgcaccggagggtgaaaaggccgtgtacgccagcctgcgcaaaggccagtttatc
gagaatatcacgctggaagatgccttggagctgtttaagctgccgcgcaacgtggggcag
tttgaggacaaggacatgacggccgccctcggccgctttggtccgtacatccgccacgac
agcaagttctactccctcactaaggagcaggatccgcacaccatcactgccgacgaagcc
gtagctctcattgaaaacaagcgcaaaaccgacgcggaacgcctgattaaggagttcccc
ggccgcgaagacgtgcaggttctcaatggccgcttcggtccctacattgtggtgggcaag
aaaaatgtaaagattccgaagggcgaagagccggcggatctgacgctggaacgctgcctg
gagctggcagaggctacccccgacaagcccgccaaaggcggccgctttgccaagaaagcc
gctccggccgccagcgaaaagaccgatacgccggtgaaaaaggccgccgccaagaaaccc
gccgctaaaaagccggcggccaaaaaacctgccgcaacgaaagctgctggtaagcctaag
tag
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