Hymenobacter sp. DG25A: AM218_12370
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Entry
AM218_12370 CDS
T04064
Name
(GenBank) AMP-dependent synthetase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
hye
Hymenobacter sp. DG25A
Pathway
hye00061
Fatty acid biosynthesis
hye00071
Fatty acid degradation
hye01100
Metabolic pathways
hye01212
Fatty acid metabolism
hye02024
Quorum sensing
hye04146
Peroxisome
Module
hye_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
hye00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
AM218_12370
00071 Fatty acid degradation
AM218_12370
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
AM218_12370
09145 Cellular community - prokaryotes
02024 Quorum sensing
AM218_12370
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
hye01004
]
AM218_12370
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hye04147
]
AM218_12370
Enzymes [BR:
hye01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
AM218_12370
Lipid biosynthesis proteins [BR:
hye01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
AM218_12370
Exosome [BR:
hye04147
]
Exosomal proteins
Exosomal proteins of breast milk
AM218_12370
Exosomal proteins of breast cancer cells
AM218_12370
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
SAP
Motif
Other DBs
NCBI-ProteinID:
ALD21853
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All DBs
Position
complement(2884515..2886296)
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AA seq
593 aa
AA seq
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MQVRRAFDVLPYQLENTPKSDCLAAKVNGTWEKMSTQQVYDAAQLVSLGLVKLGLKKDDK
VAIISMNRPEWMLADYGISQIGAVSVPMYPSITVEDYKYIFTDAGVKAIFVSDIKLYEKV
TEAIADLHIPATHIFTFDKIEGARHFSELVEMGKQGDPATLQPLKDAVQPDDLLTLIYTS
GTTGQPKGVMLSHDNILSNCRNSQRFVPVNKDDMALSFLPLCHIFERMVTYLYMINGVSI
YYAESMDVIADNLREVKPSIFTTVPRLLEKVFDKIVAKGHELTGIKKSLFFWALNLGLKY
DTQKDQGVFYNAQLALANKLIFNKWREALGGNLKWIVSGGGALQPRLARVFWAAGIRVME
GYGLTETSPVIAVGGFEPENNMIGTVGPIIDNTEVKIAPDGEILTKSASVMKGYYNKPEL
TAKEFDEEGWFHTGDIGELVNGRFLKITDRKKEMFKTSGGKYIAPQVIEGKLKESPLVEQ
CMVVGDGQKFPSVLIIPAFDQLRGWCKRNGLDCTGPNDALIKNEKIVSMYEDLVKKYNQG
FAQWEQVKKVALLPQQWTVETGEMTPTMKVKRKVIFQNNTDLIDSLYHTDSRR
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgcaagttcgtcgcgcttttgatgttctcccttaccaactggagaacacccccaaatct
gattgtctggctgcgaaagtaaacgggacgtgggagaaaatgagtacccagcaggtgtat
gatgccgcacagctcgtcagcctgggcctggtaaagctgggcctgaaaaaggacgataaa
gtggccatcatctccatgaaccgcccggagtggatgctggccgactacggcatctcgcag
attggcgccgtgagtgtgcccatgtaccccagcataacggtagaggactacaagtacatc
tttaccgatgccggcgtgaaagccatttttgtgtcggatatcaagctctatgagaaagta
accgaggctattgccgacctgcatatccccgccacgcatatttttaccttcgataagatt
gaaggcgcccgccatttctccgagctggtggaaatgggcaaacagggcgacccggctacg
ctacagccgcttaaggatgccgtgcagcccgatgatttgctcacgctcatttacaccagc
ggcaccaccggccagcctaaaggcgtgatgctgtcccacgacaacatcctgagcaactgc
cgcaactcgcagcgctttgtgccggtgaacaaggacgatatggccctgagcttcctgccg
ctctgccacatctttgagcgcatggtaacttacctctacatgattaacggcgtaagcatt
tactacgccgagagcatggacgtcattgccgacaacctgcgggaagtaaagcccagcatc
ttcaccaccgtgccgcgcctgctggaaaaggtgttcgataagattgtagccaaaggccac
gagctgacgggcatcaagaaaagcctgtttttctgggccttgaatctaggtctgaaatac
gacacccagaaagaccagggtgttttctacaacgcccagctggctttggccaataagctc
attttcaataagtggcgcgaagcgctgggcggcaacctcaaatggattgtttccggaggc
ggggcgctgcagccgcgtttggcgcgcgtgttctgggcggctggcatccgggtaatggaa
ggctatggcctcaccgaaacctcaccagttattgcggtaggcggcttcgagcccgaaaac
aacatgattggcaccgtgggccccatcatcgacaacaccgaagtaaagattgcgcccgat
ggcgaaatcctgaccaaatcggcctccgtgatgaagggctactacaataagcccgagctg
acggccaaagagtttgacgaggaaggctggttccacaccggcgacattggcgagctggta
aacggccgcttcctcaaaatcacggaccggaaaaaggaaatgttcaagacctcgggcggc
aagtacattgccccgcaggttattgaaggcaagctgaaggagtcgccgctggtagagcag
tgcatggtggtgggcgacggccagaaattcccctccgtactcattattcccgctttcgat
caactccggggctggtgcaagcgcaacgggttagactgcaccggacccaacgacgcgcta
atcaaaaacgagaagattgtatcgatgtacgaagacctagtgaagaaatacaaccagggc
tttgcgcagtgggagcaagtaaagaaagtggccctgctgccccagcaatggacggtggaa
accggcgagatgacgcccaccatgaaggtgaagcgcaaagtcatcttccagaacaacacc
gatctgatcgatagtttatatcacaccgatagccgccgctaa
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