KEGG   Hymenobacter sp. DG25A: AM218_13035
Entry
AM218_13035       CDS       T04064                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
hye  Hymenobacter sp. DG25A
Pathway
hye03030  DNA replication
hye03410  Base excision repair
hye03420  Nucleotide excision repair
hye03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:hye00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    AM218_13035
   03410 Base excision repair
    AM218_13035
   03420 Nucleotide excision repair
    AM218_13035
   03440 Homologous recombination
    AM218_13035
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hye03032]
    AM218_13035
   03400 DNA repair and recombination proteins [BR:hye03400]
    AM218_13035
Enzymes [BR:hye01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     AM218_13035
DNA replication proteins [BR:hye03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     AM218_13035
DNA repair and recombination proteins [BR:hye03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     AM218_13035
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     AM218_13035
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc DNA_pol_A_exo1 DNA_polI_exo1 HHH_2 HHH_5 RNase_H_2
Other DBs
NCBI-ProteinID: ALD21965
UniProt: A0A0M3RVX1
LinkDB
Position
3034240..3037113
AA seq 957 aa
MTDASAAPQHHKLFLLDAFALIYRAHFAFSKNPRVNSKGLNTGAILGFTNTLVEVLQKEK
PTHIGVAFDAQKKTFRHEQYAEYKAQRQAMPEDIGLAIPYIKKIIKAFNIPILMVDGFEA
DDVIGTLALRAEQQGFGEVFMMTPDKDYCQLVTDCVKIYRPAFMGNSAEVLDVQHVLQRF
EIERVEQVIDILGLQGDASDNIPGIPGIGEKTAKKLIHEFGSVENLIANADKLKGKLQEN
VRNFAEQGLMSKELATIHLDVPIEFHEENLRLEQPNAEELRQLFDELEFRQLAARVLGGG
NGPATSTPPPARGARRPSVAAGQGSLFDAAVAVAAEEGETDSLGAPSGPRHQLADVPHQY
HLIDTPELRRELLRFLLLQKEVSFDTETTGLDTMTSRLVGFSFCWLPGEAYYVPVPSDDH
TAAQKLVDEFRPFFDAEQIVKIGQNIKYDLTILKHYGVEMKGQVFDTMLAHYLLEPDMRH
NMDVLAETYLHYTPVPITALIGPKGKNQKTMADIPPAEVKDYACEDADVTLQLKHYFEPK
LQEVGLLKLLNEVENPLVPVLAAIEYEGVKIDSAAMGEYSALLQGYITELEGKIFAEAGQ
QFNIGSPKQLGEVLFDKMGLGGGKIKKTKTGQYATGEEILSVLAADAPIASLILEHRQLT
KLRSTYVEALPQLVCELDGRVHTSFNQAVTATGRLSSTNPNLQNIPIRTEKGREIRKAFV
PRDENHLLLAADYSQIELRIMADFSGDKTMIESFRQGLDIHASTASKVFKVPLDQVDGEM
RRRAKMVNFGIIYGISAFGLAQRLGVSRKEATEIIEAYFTEFSSVKQFMDDSINRARELE
YAETLLGRRRYLRDINSRNATLRGYTERNAINAPIQGTAADIIKKAMINIHHWLLEEKLG
TKMILQVHDELVFDAVKEEIAYITPKIRELMVNALPLPHGVPMEVEVGTGRNWLEAH
NT seq 2874 nt   +upstreamnt  +downstreamnt
atgaccgacgcctccgccgctccccagcaccataaactcttcctgctcgacgcttttgcc
ctgatttaccgcgcccactttgccttcagcaaaaacccgcgcgtgaactccaagggcctg
aataccggggccatcctgggctttaccaacaccctggtagaggtactgcaaaaggagaag
cccacacacattggggtagccttcgatgcgcagaaaaaaaccttccgccacgagcagtat
gcggagtataaagcccagcgccaggccatgccggaggacattgggctggccatcccttac
atcaagaaaatcatcaaagccttcaacattcccattctgatggtggatggctttgaggcc
gatgacgtgattggcactctggcgctgcgtgccgagcagcagggctttggcgaggtgttc
atgatgacgcccgacaaggattactgtcagctggtaaccgactgcgtgaagatttaccgc
cccgccttcatgggcaactccgccgaggtgctggacgtgcagcatgtgctgcagcgcttc
gagattgagcgggtagagcaggtgattgacattctgggcttgcagggcgacgcctccgac
aacattcccggcattcctggcattggcgaaaaaactgccaaaaagctcatccatgagttt
ggctccgtggaaaacctgattgccaacgccgacaagctgaagggcaagctgcaggaaaac
gtgcgcaacttcgccgagcagggcctgatgagcaaggagctggccaccattcacctggat
gtccccattgagtttcatgaggaaaacctacgcctggagcagcccaacgccgaggaactg
cgccagctgtttgatgagctggaattccggcagctggcggcccgcgtgctgggcggcggc
aatggcccggccaccagcacgcccccgccggcccgcggcgcccgccggccaagtgtagcg
gccggtcagggttctttgtttgacgcggcggtggccgttgccgcggaagaaggcgaaacc
gacagcctgggtgcgcccagcgggccgcgccaccagctggccgatgtcccgcaccagtat
cacctcattgatacccccgagttacgccgcgagctgctcaggttcctgctgctgcaaaag
gaagtcagctttgataccgaaaccaccggcctggataccatgacctcgcgcttggtgggg
ttttccttctgttggttgcccggcgaggcgtattacgtgcctgtgccgtctgacgaccac
accgcggcccaaaagctggtggatgagtttcgccccttcttcgatgccgagcagattgta
aaaatcggccagaatatcaagtacgacctcaccattctgaagcactacggggtggaaatg
aaaggccaggtgtttgataccatgctggcccactacctgctggagcccgacatgcgccac
aatatggacgtgctggctgaaacctatctgcactacacgcccgtccccatcacggctctt
atcggccccaaaggcaaaaaccagaaaaccatggccgatattccgccggctgaggtgaag
gactacgcctgcgaagatgccgacgttaccctgcagctgaagcattatttcgaacccaag
ctgcaggaggtagggctgctgaagctgctgaatgaggtagaaaacccgctggtgccggtg
ctggccgccattgagtacgaaggcgtgaagattgacagcgccgctatgggcgagtactcg
gcgctgctgcagggctacattaccgagctggaagggaagatttttgccgaagccggccag
cagttcaacattggctcgcccaagcaattgggagaggtgctgtttgataaaatgggcctg
ggtggcggtaagatcaagaaaaccaaaaccgggcagtacgccactggcgaggaaatcctg
agcgtgctggccgccgatgcgcccattgccagcctcattctggaacaccgccagcttact
aagctgcgcagcacctacgtagaggccctgccccagctggtgtgcgagctggatggccgc
gtgcatacctccttcaaccaggccgtaacggccacgggccgcctgagcagcaccaacccc
aacctgcagaacattcccattcgcacggaaaagggccgcgaaattcgcaaagcctttgta
ccgcgcgacgaaaaccacctgctgctggccgccgactactcgcagattgagctgcgcatc
atggccgatttttcgggcgacaaaaccatgattgagtcgttccgccaagggcttgatatt
cacgccagcactgccagcaaggtgtttaaagtgcccttggaccaggtagatggcgagatg
cgccgccgggccaaaatggtcaattttggcatcatatacggcatttcggccttcgggctg
gcccagcgcctgggcgtttcgcgcaaggaggctaccgaaattattgaagcctatttcacg
gagttttcctcggtgaagcagttcatggacgacagcatcaaccgcgcccgggagctggaa
tatgccgaaaccctgctgggccgccgccgctacctgcgcgacatcaactcccgcaacgcc
acgctccgcggctacacggaacgcaacgccattaacgcccccatccagggcaccgcggcc
gacatcatcaagaaggccatgatcaacattcatcactggctcctggaagaaaagctgggc
accaaaatgattctgcaggtgcacgatgaattggtgttcgatgctgtgaaagaggaaatt
gcgtacatcacgcccaaaatcagggagctgatggttaatgccctgcccctgccccacggc
gtgcccatggaagtggaagtaggcaccggccgcaactggctggaagcgcactag

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