Hymenobacter sp. DG25A: AM218_13385
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Entry
AM218_13385 CDS
T04064
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
hye
Hymenobacter sp. DG25A
Pathway
hye03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hye00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AM218_13385
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hye03400
]
AM218_13385
DNA repair and recombination proteins [BR:
hye03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AM218_13385
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AM218_13385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
nSTAND1
AAA_29
DnaJ_CXXCXGXG
RsgA_GTPase
AAA_16
AAA_21
AAA_25
PPPI_inhib
AAA_15
Spb1_C
Motif
Other DBs
NCBI-ProteinID:
ALD22819
UniProt:
A0A0M3RW78
LinkDB
All DBs
Position
complement(3118652..3121531)
Genome browser
AA seq
959 aa
AA seq
DB search
MAAHSTVRPLAADVEAPFIEVYGAREHNLKNVTVKIPRGKLVVFTGISGSGKSSLAFDTI
YAEGQRRYMETFSAYARSFMGGLERPDVDKIEGLSPVISIEQKTTSRNPRSTVGTITEIY
DFLRLFYARTAEAFSYATGKKMIRQSDDQIINYILKHFDTGKLVVLAPVVKGRKGHYREL
FQQIAKLGFTKVRVDGELLDITAKMQVDRYKIHDIEIVIDRLTVKEEDRFRLSGSVQNAL
THGKGTMLVLDPDSEKTQFFSRFLMDPTTGIAYDDPAPNTFSFNSPYGACPVCNGLGEVQ
EITRESVMPDTKLSISRGGIAPLGEYRDIWIFQQLGLILKKHKASLSTPIDKLPAELVDR
MLHGIPEDEDADPKKAGYTEPFEGIIPFLRRQMDSESDNIREWIQQYTQAKECPECHGYR
LKKESLHFKIADHHIGELSVMDIKQLAEWFEDLENRLTDRQNLIARELLKEIRKRIGFLL
EVGLDYLDLHRSVRTLSGGESQRIRLATQIGTQLVGVLYIMDEPSIGLHQRDNERLIKAL
QHLRDLGNSVIVVEHDKDMIMHADHVLDIGPGAGIHGGHIVAEGTPKEIFSSGSLTSQYL
SGQKHIELRKTKRTGDGGELVLKGAKGHNLKNVTAKFPLGKFIAVTGVSGSGKSSLIHDT
LYPILNQYFFNAKREPLAYGSIEGLDLIDKVIEVDQSPIGRTPRSNPATYTGVFTEIRQL
YSSLPEAKIRGYGPGRFSFNVKGGRCETCEGAGMRTIEMNFLPDVHVPCETCKGRRYNRE
TLEVRFKGKSITDVLDMTVEKAVEFFEFQPRILRKIKTLNEVGLGYLTLGQQATTLSGGE
AQRVKLATELSKKDTGKTFYILDEPTTGLHFEDINHLAVVLQKLADKGNTVLIIEHNLDL
IKVADYVIDIGPEGGAGGGSIVAQGTPEQVSKSKKGYTARFLAEELKTSKYAEEEAPVA
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
gtggctgcgcattccactgtccggcccttggccgccgatgtggaggcgccgtttattgaa
gtatacggggcgcgggagcacaacctgaagaacgttactgtcaaaattccgcgcggcaag
ctggtggtcttcaccggtatttccggctcgggcaagtcgtcgttggcgtttgatacgatt
tacgccgaaggccagcgccgctacatggagacgttttcggcctatgcccgctccttcatg
ggcgggctggagcggcccgatgtagacaagattgagggcctgtcgccggttatcagcatc
gagcagaaaaccacctcgcgcaacccccgctccacggtaggcaccatcacggagatttac
gatttcctgcgcctgttctacgcccgcacggccgaggcgttcagctatgccacgggcaaa
aagatgatccggcagtcagacgaccagatcatcaactacattctcaagcactttgatacc
ggcaagctggtggtgctggcaccagtggtgaaaggccgcaaaggccactaccgcgagctg
tttcagcagattgccaagctgggcttcaccaaagtgcgcgtagatggcgagctgctcgac
atcacggccaagatgcaggtggaccgctacaaaattcacgacatcgaaattgtcattgac
cggctgacggtgaaggaggaggaccggttccgcctctcgggctcggtgcagaatgcgcta
acccacggcaaaggcaccatgctggtgctggaccccgattccgagaagacccagttcttc
tcgcgctttctgatggaccccaccaccggcattgcctacgacgacccggcgccgaatacc
ttctcctttaactcgccctacggcgcctgccccgtgtgcaacggcctgggcgaggtgcag
gaaatcacccgcgagtcggtgatgcccgataccaagctcagcatcagccggggtggcatt
gcaccgctgggcgagtaccgcgacatctggattttccagcagctgggcctgattctcaaa
aagcacaaagccagcctgagcacgcccattgataagctgcccgccgagctggtggaccgc
atgctgcacggcattccggaagatgaagacgccgaccccaaaaaagcaggctataccgag
ccgtttgaaggcattattcccttcctgcgccggcagatggattccgagtcggataacatc
cgggaatggattcagcagtacacccaggccaaagagtgtcctgagtgccacggctaccgc
ctgaagaaagaaagcctacacttcaaaattgccgaccaccacattggtgagctgtcggtg
atggatattaagcagctggcggagtggtttgaggatctggaaaaccgcctgacggaccga
cagaacctgattgcgcgcgagctgctgaaggaaatccgcaagcgcatcggctttttgctg
gaagtgggcctggattacctggatctgcaccgctccgtgcgcacgctctcgggcggcgaa
agccagcgcattcgtctggccacgcagattggtacccagctggtgggcgtgctctacatt
atggacgagcccagcattggcctgcaccagcgcgacaacgagcggctgatcaaggccctg
cagcacctgcgggatttgggcaactccgtgattgtggtggagcacgacaaggacatgatt
atgcacgccgaccacgtgctggacattggtccgggcgcgggcatccatggcgggcacatt
gtggccgaaggcacgccaaaggaaatcttctccagcggctcgctcacctcccagtatctc
agtggccagaagcacattgagctgcgcaaaaccaagcgcaccggcgacgggggcgagctg
gtgctgaaaggcgccaaaggccacaacctgaaaaacgtgacggcgaaattccccctgggc
aagttcattgccgtcacgggcgtgtcgggctcgggcaagtcctcgcttattcacgatacg
ctataccccatcctcaaccagtacttctttaatgccaagcgcgagccgctggcttacggc
agcattgaagggctggacctgattgataaggtgattgaggtggatcagtcgccgattggg
cgcaccccgcgctccaacccggccacctacacgggtgtgttcacggagattcgtcagctg
tattcctcgctgccggaagccaaaatccggggctatgggccggggcgcttctccttcaac
gtgaagggcgggcgctgcgaaacctgcgagggcgccggcatgcgcaccattgaaatgaac
tttctgcccgacgtgcacgtgccctgcgaaacctgcaaaggccgccgctacaaccgcgaa
acgctggaagtgcgcttcaaaggcaagtcgattaccgacgtgctggacatgacggtggaa
aaagccgtggagttctttgagtttcagccccgcatcctgcgcaaaatcaaaacgctgaat
gaggtgggcctgggttacctcacgctgggccagcaggctaccacgctatccggcggcgaa
gcgcagcgcgtgaagctggccacggagctcagcaaaaaggacaccggcaaaacgttctat
atcctggatgagcccaccaccggtctgcacttcgaggacatcaaccacctggccgtggta
ctccagaagctggccgacaaaggcaacaccgtcctcatcattgagcataacctggacctg
attaaagtggccgactacgttattgacatcggccccgaaggtggcgcgggcggcggctct
attgtggcgcagggtacgcccgagcaggtgtcaaaaagcaagaaaggctacacagcccgc
tttctggccgaggagctgaaaaccagcaaatacgccgaggaagaagccccggttgcctaa
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