KEGG   Hymenobacter sp. DG25A: AM218_13385
Entry
AM218_13385       CDS       T04064                                 
Name
(GenBank) excinuclease ABC subunit A
  KO
K03701  excinuclease ABC subunit A
Organism
hye  Hymenobacter sp. DG25A
Pathway
hye03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:hye00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    AM218_13385
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hye03400]
    AM218_13385
DNA repair and recombination proteins [BR:hye03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     AM218_13385
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      AM218_13385
SSDB
Motif
Pfam: UvrA_inter UvrA_DNA-bind ABC_tran SMC_N nSTAND1 AAA_29 DnaJ_CXXCXGXG RsgA_GTPase AAA_16 AAA_21 AAA_25 PPPI_inhib AAA_15 Spb1_C
Other DBs
NCBI-ProteinID: ALD22819
UniProt: A0A0M3RW78
LinkDB
Position
complement(3118652..3121531)
AA seq 959 aa
MAAHSTVRPLAADVEAPFIEVYGAREHNLKNVTVKIPRGKLVVFTGISGSGKSSLAFDTI
YAEGQRRYMETFSAYARSFMGGLERPDVDKIEGLSPVISIEQKTTSRNPRSTVGTITEIY
DFLRLFYARTAEAFSYATGKKMIRQSDDQIINYILKHFDTGKLVVLAPVVKGRKGHYREL
FQQIAKLGFTKVRVDGELLDITAKMQVDRYKIHDIEIVIDRLTVKEEDRFRLSGSVQNAL
THGKGTMLVLDPDSEKTQFFSRFLMDPTTGIAYDDPAPNTFSFNSPYGACPVCNGLGEVQ
EITRESVMPDTKLSISRGGIAPLGEYRDIWIFQQLGLILKKHKASLSTPIDKLPAELVDR
MLHGIPEDEDADPKKAGYTEPFEGIIPFLRRQMDSESDNIREWIQQYTQAKECPECHGYR
LKKESLHFKIADHHIGELSVMDIKQLAEWFEDLENRLTDRQNLIARELLKEIRKRIGFLL
EVGLDYLDLHRSVRTLSGGESQRIRLATQIGTQLVGVLYIMDEPSIGLHQRDNERLIKAL
QHLRDLGNSVIVVEHDKDMIMHADHVLDIGPGAGIHGGHIVAEGTPKEIFSSGSLTSQYL
SGQKHIELRKTKRTGDGGELVLKGAKGHNLKNVTAKFPLGKFIAVTGVSGSGKSSLIHDT
LYPILNQYFFNAKREPLAYGSIEGLDLIDKVIEVDQSPIGRTPRSNPATYTGVFTEIRQL
YSSLPEAKIRGYGPGRFSFNVKGGRCETCEGAGMRTIEMNFLPDVHVPCETCKGRRYNRE
TLEVRFKGKSITDVLDMTVEKAVEFFEFQPRILRKIKTLNEVGLGYLTLGQQATTLSGGE
AQRVKLATELSKKDTGKTFYILDEPTTGLHFEDINHLAVVLQKLADKGNTVLIIEHNLDL
IKVADYVIDIGPEGGAGGGSIVAQGTPEQVSKSKKGYTARFLAEELKTSKYAEEEAPVA
NT seq 2880 nt   +upstreamnt  +downstreamnt
gtggctgcgcattccactgtccggcccttggccgccgatgtggaggcgccgtttattgaa
gtatacggggcgcgggagcacaacctgaagaacgttactgtcaaaattccgcgcggcaag
ctggtggtcttcaccggtatttccggctcgggcaagtcgtcgttggcgtttgatacgatt
tacgccgaaggccagcgccgctacatggagacgttttcggcctatgcccgctccttcatg
ggcgggctggagcggcccgatgtagacaagattgagggcctgtcgccggttatcagcatc
gagcagaaaaccacctcgcgcaacccccgctccacggtaggcaccatcacggagatttac
gatttcctgcgcctgttctacgcccgcacggccgaggcgttcagctatgccacgggcaaa
aagatgatccggcagtcagacgaccagatcatcaactacattctcaagcactttgatacc
ggcaagctggtggtgctggcaccagtggtgaaaggccgcaaaggccactaccgcgagctg
tttcagcagattgccaagctgggcttcaccaaagtgcgcgtagatggcgagctgctcgac
atcacggccaagatgcaggtggaccgctacaaaattcacgacatcgaaattgtcattgac
cggctgacggtgaaggaggaggaccggttccgcctctcgggctcggtgcagaatgcgcta
acccacggcaaaggcaccatgctggtgctggaccccgattccgagaagacccagttcttc
tcgcgctttctgatggaccccaccaccggcattgcctacgacgacccggcgccgaatacc
ttctcctttaactcgccctacggcgcctgccccgtgtgcaacggcctgggcgaggtgcag
gaaatcacccgcgagtcggtgatgcccgataccaagctcagcatcagccggggtggcatt
gcaccgctgggcgagtaccgcgacatctggattttccagcagctgggcctgattctcaaa
aagcacaaagccagcctgagcacgcccattgataagctgcccgccgagctggtggaccgc
atgctgcacggcattccggaagatgaagacgccgaccccaaaaaagcaggctataccgag
ccgtttgaaggcattattcccttcctgcgccggcagatggattccgagtcggataacatc
cgggaatggattcagcagtacacccaggccaaagagtgtcctgagtgccacggctaccgc
ctgaagaaagaaagcctacacttcaaaattgccgaccaccacattggtgagctgtcggtg
atggatattaagcagctggcggagtggtttgaggatctggaaaaccgcctgacggaccga
cagaacctgattgcgcgcgagctgctgaaggaaatccgcaagcgcatcggctttttgctg
gaagtgggcctggattacctggatctgcaccgctccgtgcgcacgctctcgggcggcgaa
agccagcgcattcgtctggccacgcagattggtacccagctggtgggcgtgctctacatt
atggacgagcccagcattggcctgcaccagcgcgacaacgagcggctgatcaaggccctg
cagcacctgcgggatttgggcaactccgtgattgtggtggagcacgacaaggacatgatt
atgcacgccgaccacgtgctggacattggtccgggcgcgggcatccatggcgggcacatt
gtggccgaaggcacgccaaaggaaatcttctccagcggctcgctcacctcccagtatctc
agtggccagaagcacattgagctgcgcaaaaccaagcgcaccggcgacgggggcgagctg
gtgctgaaaggcgccaaaggccacaacctgaaaaacgtgacggcgaaattccccctgggc
aagttcattgccgtcacgggcgtgtcgggctcgggcaagtcctcgcttattcacgatacg
ctataccccatcctcaaccagtacttctttaatgccaagcgcgagccgctggcttacggc
agcattgaagggctggacctgattgataaggtgattgaggtggatcagtcgccgattggg
cgcaccccgcgctccaacccggccacctacacgggtgtgttcacggagattcgtcagctg
tattcctcgctgccggaagccaaaatccggggctatgggccggggcgcttctccttcaac
gtgaagggcgggcgctgcgaaacctgcgagggcgccggcatgcgcaccattgaaatgaac
tttctgcccgacgtgcacgtgccctgcgaaacctgcaaaggccgccgctacaaccgcgaa
acgctggaagtgcgcttcaaaggcaagtcgattaccgacgtgctggacatgacggtggaa
aaagccgtggagttctttgagtttcagccccgcatcctgcgcaaaatcaaaacgctgaat
gaggtgggcctgggttacctcacgctgggccagcaggctaccacgctatccggcggcgaa
gcgcagcgcgtgaagctggccacggagctcagcaaaaaggacaccggcaaaacgttctat
atcctggatgagcccaccaccggtctgcacttcgaggacatcaaccacctggccgtggta
ctccagaagctggccgacaaaggcaacaccgtcctcatcattgagcataacctggacctg
attaaagtggccgactacgttattgacatcggccccgaaggtggcgcgggcggcggctct
attgtggcgcagggtacgcccgagcaggtgtcaaaaagcaagaaaggctacacagcccgc
tttctggccgaggagctgaaaaccagcaaatacgccgaggaagaagccccggttgcctaa

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