Hymenobacter sp. DG25A: AM218_13855
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Entry
AM218_13855 CDS
T04064
Name
(GenBank) pseudouridine synthase
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
hye
Hymenobacter sp. DG25A
Brite
KEGG Orthology (KO) [BR:
hye00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hye03016
]
AM218_13855
Enzymes [BR:
hye01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
AM218_13855
Transfer RNA biogenesis [BR:
hye03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AM218_13855
Prokaryotic type
AM218_13855
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Phage_XkdX
DUF7442
Motif
Other DBs
NCBI-ProteinID:
ALD22095
UniProt:
A0A0M3RVZ7
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All DBs
Position
complement(3230310..3231101)
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AA seq
263 aa
AA seq
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MRYFLHLGYDGSLYHGWQVQPNTLTVQRELDRCLSQVLRQPVYSLGSGRTDSGVHASHQV
AHFDAEIPDTLDPETLLYRLNRALPRDIRVYAVHPVPDKANARFDAEARTYEYHVRLVPD
PFTPAHALYLDRAPDLAAMNQAAGYLLGSRDFTSFSKVKGGEKHYVCVCYEAGWREVPGG
LIFRIRANRFVRGMVRLVVGTLLTVGRGKITPEEFKQILDDQSRVAASGAAPANGLFLAR
VEYPPELVPVEQLPAGMPYFVSR
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
ttgcgctacttccttcatctcggctacgatggcagcctgtaccacggctggcaggtacaa
cccaacacgctgacggtgcagcgcgagctggaccgctgcctgtcgcaggtgctgcgccag
ccggtgtactccctgggcagcggccgcaccgattccggcgtgcacgccagccatcaggta
gcgcattttgacgccgaaatacccgacacgcttgaccccgaaacactgctgtaccggctt
aaccgggcgctgccgcgcgatattcgggtgtatgcggtgcatccggtgccggataaagcc
aacgcccgcttcgatgccgaagcccgcacctacgagtaccacgtacgcctcgtgcccgac
cccttcacgcccgcccacgccctctacctcgaccgcgccccggatctggcagccatgaac
caggcggccggttacctgctgggctcccgcgacttcaccagcttttccaaagtgaaaggc
ggtgagaagcactacgtgtgcgtttgctacgaggccggctggcgcgaagtgcccggcggg
cttattttccgcatccgggccaaccgttttgtgcggggcatggtgcggctggtggtgggc
acgctgctcaccgtgggccgcggtaagatcacgcccgaagagttcaagcagattctggac
gaccagagccgggtggcggccagcggcgcggccccggccaacggcctgtttctggcccgg
gtggaatatccgcccgaactggtgccggtagaacagctacccgccggaatgccgtacttt
gtgagccgttag
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