KEGG   Hymenobacter sp. DG25A: AM218_14035
Entry
AM218_14035       CDS       T04064                                 
Name
(GenBank) recombinase RecJ
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
hye  Hymenobacter sp. DG25A
Pathway
hye03410  Base excision repair
hye03430  Mismatch repair
hye03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:hye00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    AM218_14035
   03430 Mismatch repair
    AM218_14035
   03440 Homologous recombination
    AM218_14035
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hye03400]
    AM218_14035
DNA repair and recombination proteins [BR:hye03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     AM218_14035
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     AM218_14035
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      AM218_14035
SSDB
Motif
Pfam: RecJ_OB DHH DHHA1
Other DBs
NCBI-ProteinID: ALD22122
UniProt: A0A0M5JW88
LinkDB
Position
complement(3267641..3269365)
AA seq 574 aa
MQKRWIRKPAPDPEKVRHLADALRVNPSIVALLCQRDVCTFEEARAYFRPSLEELPDPLL
MRDMDRAVTRLQHALHAGEKVLVFGDYDVDGTTSVAVVYAYLHAFFGSERIDYYIPDRYK
EGYGISDAGIDFAADNGYALIIALDCGVKAVDKIAYANTKGVDFIICDHHLPGDELPAAI
AVLDPKRADCPYPFKELSGCGVGFKLMQAFCQHLGQEEAPLHELLDLLSVSIAADIVPIT
GENRTLAYHGLRLLNDAAHPQRPGLDALRDLAGLRESKLNISSLVFGFSPRINAAGRMGD
AKRAVSMLLAQSKEDAFEKASVVDKTNQDRRGFDTRITKEALDMIEADASMRDARSTVLY
NETWHKGVIGIVASRCLDKYYRPTIILTESNGKATGSARSVMGFDVHQAILECADLLDQF
GGHMYAAGLTLPVENVPAFQRRFEEVVSARITDEQLIPAVEIDGELDLSDITMSFYKLLC
QMEPFGPGNANPTFVSHGVHAQPDSARIVGTSHLKIVLTQDGHHSVDAIGFGLGDFLPQI
QQGRPFSVCYTVELNEYRGVKTLQLRLKDLRWEE
NT seq 1725 nt   +upstreamnt  +downstreamnt
atgcaaaaacgatggatccggaagcctgcgcccgaccctgaaaaggtccggcacctggcc
gacgccttgcgcgtcaatccttccattgtggccctgctgtgccagcgcgacgtatgcacc
tttgaggaagcccgcgcgtatttccgtccctccctggaggagctgccagaccccttgctg
atgcgcgacatggaccgcgccgtaacccgcctgcagcacgctctgcacgccggggagaaa
gtgctggttttcggcgactacgacgtggacgggactacctccgtggccgtggtgtatgcc
tatttgcacgcctttttcgggtcggagcgcatcgactactacattccggaccgctacaaa
gaaggctacggcatttcggacgccggcatcgactttgccgctgacaacggctacgccctg
attattgcgctggactgcggcgtgaaggccgtggataaaatagcctacgccaacaccaag
ggcgtcgacttcatcatttgcgaccaccacttgcccggtgatgagctgccggcggccata
gccgtgctggaccccaagcgcgccgactgcccgtatccgtttaaggagctttccggctgt
ggcgtgggctttaagctgatgcaggctttctgtcagcatctgggccaggaggaagctccg
ctgcacgagctgctggatttattgtcggtgagtattgcggcggatatcgtgcccattacc
ggcgagaaccgcacactggcttaccacggcctgcgcctgctcaacgacgccgcgcacccc
cagcgcccgggcctcgatgctctgcgggacctggccgggctgcgggaaagcaagctcaac
atcagcagcctggtctttggcttctcgccccgcattaacgcggccggccgcatgggcgac
gccaagcgcgcggtttctatgctgctggcccagagcaaggaagacgcctttgagaaggcc
agcgtggtagacaaaaccaaccaggaccgccgcggcttcgatacgcgcatcaccaaggaa
gctctggacatgattgaggccgacgccagcatgcgcgacgcccgctccacagtgctctac
aacgaaacctggcacaagggcgtcatcggaattgtggcttcccgctgcctcgataaatat
taccggcctaccatcatcctcaccgaaagcaacggtaaagccaccggctcggcccgctcc
gtaatggggtttgatgtgcaccaggccattctggaatgcgccgatttgctggaccagttt
ggcgggcacatgtacgcggccggcctcacgctgccggtagaaaacgtgcctgctttccag
cggcgctttgaggaagtcgtgtcggcgcgcattacggatgagcagctgattccggcggtg
gaaattgatggtgagctggacctgagcgacatcaccatgagcttctacaagctgctctgc
cagatggagcccttcggccccggcaatgccaatcccacctttgtgtcgcacggcgtacac
gcccagcctgactctgcgcggattgtggggacctcgcatttgaaaattgtgctcacgcag
gatggccaccacagcgtggatgccattggctttggcctgggcgacttcctgccccagatc
cagcagggccgcccgttcagcgtgtgctatacggtggagctgaacgagtaccgcggcgta
aaaactctgcagctgcgcctgaaagatttgcgctgggaagaatag

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