Ephemeroptericola cinctiostellae: DTO96_100175
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Entry
DTO96_100175 CDS
T05560
Symbol
rluF
Name
(GenBank) 23S rRNA pseudouridine(2604) synthase
KO
K06182
23S rRNA pseudouridine2604 synthase [EC:
5.4.99.21
]
Organism
hyf
Ephemeroptericola cinctiostellae
Brite
KEGG Orthology (KO) [BR:
hyf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hyf03009
]
DTO96_100175 (rluF)
Enzymes [BR:
hyf01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.21 23S rRNA pseudouridine2604 synthase
DTO96_100175 (rluF)
Ribosome biogenesis [BR:
hyf03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
DTO96_100175 (rluF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
AXF84467
UniProt:
A0A345D7X9
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All DBs
Position
169558..171420
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AA seq
620 aa
AA seq
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MSKTLKIGTRGDAPVNSERTRQPLRGRNRNNQSAVPARPAHTESHPSGYGDKPRGNFNDR
NDRPPRRDGDAPRRDFGDRPQRSFDDKPRSNFGDRPRGNFNDRNDRPPRRDGDAPRRDFG
DRPQRSFDDKPRGNFGDRPRSNFSDRNDRPPRRDGDAPRRDFGDRPQRSFDDKPRGTFGD
RPRSNFSDRNDRPPRRDGDAPRRDFGDRPQRSFDDKPRGSFGDRPRSNTGERNDRPPRRD
GDAPRRDFGDRPQRSFDDKPRGNFGDRPRGNFSDRNDRPPRRDGDAPRRDFGDRPQRSFD
DKPRGSFGDRPRSNTGERNDRPPRRDGDAPRRDFGDRPQRSFDDKPRAPRREVEVVLREA
SDYAASRGREPRATDRDPNAGIRVSKYLTETGVCSRREADHYIEKGWVTVNGKRAALGQR
VLPTDNIQLARQLTAAQEKRMTILINKPVGFVSGQAEDGYIPAVNLIEPASRWEGDTTSH
ELENVHVRGMAPAGRLDIDSTGLLVLTQDGRIAKALIGDKSEIDKEYLVRVEGELSEDGL
ALLNHGLELDGIPLRPAQVTWQNDDQLRFVLTEGKKRQIRRMCELVGLHVVGLKRIRIGK
VTLGDLPVGQWRYLRDDEAF
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaacactcaaaatcggcacgcgtggtgacgcgcccgtaaacagcgaacgcacg
cgccagcctctgcgcggccgcaaccgcaacaatcaatcggccgtacccgcgcgccccgca
cacaccgaatcacacccaagcggctatggtgataagccacgcggtaacttcaatgaccgt
aacgaccgtccaccgcgccgcgatggcgatgcgcctcgccgagatttcggcgatcgccca
caacgcagctttgatgacaaaccacgtagcaactttggcgaccgccctcgtggcaacttc
aacgaccgcaatgaccgtccaccgcgccgcgatggtgatgcgcctcgccgagatttcggc
gatcgcccacaacgcagctttgatgacaaaccacgtggcaactttggcgaccgccctcgc
agcaacttcagcgaccgtaacgaccgcccaccgcgccgtgatggcgatgcacctcgccga
gatttcggtgatcgcccgcaacgcagctttgatgacaaaccacgcggtacttttggcgac
cgtcctcgcagcaacttcagcgaccgtaacgaccgtccaccgcgccgcgatggcgatgcg
cctcgccgagatttcggtgatcgcccacaacgcagctttgatgacaaaccacgtggtagt
tttggtgaccgccctcgcagcaacacaggtgaacgcaatgaccgcccacctcgccgcgat
ggtgatgcgcctcgccgagatttcggtgatcgcccgcaacgcagctttgatgacaaacca
cgtggcaactttggcgaccgtcctcgcggcaacttcagcgaccgtaacgaccgcccaccg
cgccgcgatggtgatgcacctcgccgagatttcggtgatcgcccacaacgcagtttcgat
gacaaaccacgcggtagttttggcgaccgtcctcgcagcaacacaggtgaacgcaatgac
cgtccacctcgccgcgatggtgatgcgcctcgccgagatttcggtgatcgcccgcaacgc
agctttgatgacaaaccacgcgcaccacgtcgtgaagttgaagtcgtgttacgcgaagct
tctgattacgctgcatcacgtggtcgcgagccacgtgcgactgaccgcgatcccaatgca
ggcatccgtgtttcaaaatacctgaccgaaacaggcgtgtgctcacgccgcgaagccgat
cattacatcgaaaaaggctgggtcacggtcaatggtaaacgcgcagccctcggacaacgt
gtgttgcccacagacaacatccaattggctcgtcagctgactgcggctcaagaaaaacgc
atgaccattttgatcaacaaacccgttggttttgtttcaggtcaggcagaagatggttac
attcctgcggtcaatttaattgagccggcatcacgctgggagggtgacaccacgtcacac
gaactggaaaatgtgcacgtgcgcggcatggcacccgcggggcgtttggacattgattcc
acgggcttattggtgttgacccaagatggtcgcattgccaaagcgctgatcggcgataaa
agtgaaatcgataaagaatacctcgtgcgggtcgaaggcgagttaagcgaagatggtttg
gctttgctcaaccatggtttggagcttgatggcattccattgcgccccgctcaagtgact
tggcaaaatgacgatcagttgcgctttgtgctgacagaaggtaaaaaacgccaaattcgc
cgcatgtgtgagttggttggattgcatgttgtgggcttgaagcggatccgcatcgggaaa
gtcaccctcggtgatttgcctgtgggccaatggcgttatttgcgcgatgatgaagcgttt
taa
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