Ephemeroptericola cinctiostellae: DTO96_100240
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Entry
DTO96_100240 CDS
T05560
Symbol
ihfB
Name
(GenBank) Integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
hyf
Ephemeroptericola cinctiostellae
Brite
KEGG Orthology (KO) [BR:
hyf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hyf03032
]
DTO96_100240 (ihfB)
03036 Chromosome and associated proteins [BR:
hyf03036
]
DTO96_100240 (ihfB)
03400 DNA repair and recombination proteins [BR:
hyf03400
]
DTO96_100240 (ihfB)
DNA replication proteins [BR:
hyf03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
DTO96_100240 (ihfB)
Chromosome and associated proteins [BR:
hyf03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
DTO96_100240 (ihfB)
DNA repair and recombination proteins [BR:
hyf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
DTO96_100240 (ihfB)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
TetR_C_30
BHD_2
Motif
Other DBs
NCBI-ProteinID:
AXF84531
UniProt:
A0A345D843
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All DBs
Position
complement(237870..238166)
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AA seq
98 aa
AA seq
DB search
MTKSELIANLAARFPQLLARDAEMATHAILDAISHTLAMEQRVEIRGFGSFSVSARSSRV
GRNPKTGEQVIVPTKKVPHFKAGKDMRERVDQAGSASE
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaatctgaattgatcgccaacttagccgcacgctttccgcagttgctcgcgcgc
gatgccgaaatggcgacccatgcgattttggacgccatctcacatacgctcgcgatggag
cagcgcgtcgagattcgtgggttcggcagtttttctgtgagcgcccgttcatcacgtgtg
gggcgcaatccaaaaaccggtgagcaagtgattgtacccacaaaaaaggtacctcatttt
aaggcgggtaaggacatgcgtgagcgcgttgatcaagcgggctcggcttcagagtag
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